RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA591127" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA591127 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1138908 1138908 PRJNA591127_P_NODE_3501_length_384_cov_4.685879_g3333_i0 PRJNA591127 3501 384 4.685879 17.99377536 Fungi 4751 Fungi Fungi 708 0   NTclustered gi|1493534650|gb|MK070014.1| 4846 g3333 i0 100 95.0286458333333 383 0 99 0 1 383 318 700 Rhizopus stolonifer strain M7RJF large subunit ribosomal RNA gene, partial sequence blastn 36491 708 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
3115900 3115900 PRJNA591127_P_NODE_11803_length_214_cov_7.254237_g11634_i0 PRJNA591127 11803 214 7.254237 15.52406718 Mycotypha africana 64632 Fungi Fungi 230 8.11e-56   NTclustered gi|2432557843|ref|XM_053079915.1| 64632 g11634 i0 91.124 79.2009345794392 169 15 79 0 46 214 50 218 Mycotypha africana actin (BDF20DRAFT_849611), mRNA blastn 16949 230 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
3116092 3116092 PRJNA591127_P_NODE_4743_length_335_cov_1.771812_g4575_i0 PRJNA591127 4743 335 1.771812 5.9355702 Gamsiella multidivaricata 101098 Fungi Fungi 259 1.73e-64   NTclustered gi|2323795118|ref|XM_051552974.1| 101098 g4575 i0 84.387 75.2059701492537 269 36 79 6 18 283 552 817 Gamsiella multidivaricata ribosomal protein S9 (BC939DRAFT_414139), mRNA blastn 25194 259 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
5668814 5668814 PRJNA591127_P_NODE_2285_length_462_cov_127.971765_g2122_i0 PRJNA591127 2285 462 127.971765 591.2295543 Rhizopus stolonifer 4846 Fungi Fungi 787 0   NTclustered gi|82398553|gb|DQ273817.1| 4846 g2122 i0 97.408 103.497835497835 463 10 100 2 1 462 1570 2031 Rhizopus stolonifer isolate AFTOL-ID 632 28S ribosomal RNA gene, partial sequence blastn 47816 787 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
11342182 11342182 PRJNA591127_P_NODE_2549_length_442_cov_6.723457_g2383_i0 PRJNA591127 2549 442 6.723457 29.71767994 Eukaryota 2759 Fungi Fungi 817 0   NTclustered gi|1272210360|gb|KY780631.1| 4846 g2383 i0 100 99.6334841628959 442 0 100 0 1 442 1026 585 Rhizopus stolonifer strain cy3 18S ribosomal RNA gene, partial sequence blastn 44038 817 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
14593895 14593895 PRJNA591127_P_NODE_21952_length_188_cov_4.947020_g21783_i0 PRJNA591127 21952 188 4.94702 9.3003976 Rhizopus stolonifer 4846 Fungi Fungi 348 1.84e-91   NTclustered gi|82398553|gb|DQ273817.1| 4846 g21783 i0 100 101.276595744681 188 0 100 0 1 188 2545 2732 Rhizopus stolonifer isolate AFTOL-ID 632 28S ribosomal RNA gene, partial sequence blastn 19040 348 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
15166917 15166917 PRJNA591127_P_NODE_27152_length_157_cov_5.725000_g26983_i0 PRJNA591127 27152 157 5.725 8.98825 Fungi 4751 Fungi Fungi 291 2.52e-74   NTclustered gi|2516474252|gb|OR122327.1| 4846 g26983 i0 100 99.7133757961783 157 0 100 0 1 157 693 849 Rhizopus stolonifer isolate ARM 1033 large subunit ribosomal RNA gene, partial sequence blastn 15655 291 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
17142806 17142806 PRJNA591127_P_NODE_3734_length_373_cov_8.479167_g3566_i0 PRJNA591127 3734 373 8.479167 31.62729291 Rhizopus delemar 936053 Fungi Fungi 267 1.16e-66   NTclustered gi|2797482204|ref|XM_067670111.1| 246409 g3566 i0 79.62 89.313672922252 368 58 96 13 14 370 1 362 Rhizopus delemar RA 99-880 ubiquitin-60S ribosomal protein L40 (RO3G_15527), partial mRNA blastn 33314 267 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
17142808 17142808 PRJNA591127_P_NODE_3914_length_365_cov_4.207317_g3746_i0 PRJNA591127 3914 365 4.207317 15.35670705 Mycotypha africana 64632 Fungi Fungi 163 1.53e-35   NTclustered gi|2432567435|ref|XM_053081336.1| 64632 g3746 i0 87.413 16.227397260274 143 16 56 2 1 142 201 342 Mycotypha africana 40S ribosomal protein S8 (BDF20DRAFT_875631), partial mRNA blastn 5923 163 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
17716791 17716791 PRJNA591127_P_NODE_5474_length_312_cov_32.516364_g5306_i0 PRJNA591127 5474 312 32.516364 101.45105568 Rhizopus 4842 Fungi Fungi 521 1.8499999999999998e-143   NTclustered gi|336126962|gb|HM172866.1| 4846 g5306 i0 96.805 100.282051282051 313 9 100 1 1 312 18 330 Rhizopus stolonifer culture-collection FSU<DEU>:9868 18S small subunit ribosomal RNA gene, partial sequence blastn 31288 521 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
20967347 20967347 PRJNA591127_P_NODE_4597_length_339_cov_4.466887_g4429_i0 PRJNA591127 4597 339 4.466887 15.14274693 Rhizopus stolonifer 4846 Fungi Fungi 621 1.95e-173   NTclustered gi|1336687659|gb|MG865992.1| 4846 g4429 i0 99.705 96.929203539823 339 1 100 0 1 339 13 351 Rhizopus stolonifer voucher Rhs sequence blastn 32859 621 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;