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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA591127" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA591127 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
565179 565179 PRJNA591127_P_NODE_4161_length_356_cov_2.122257_g3993_i0 PRJNA591127 4161 356 2.122257 7.55523492 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 553 7.579999999999998e-153   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g3993 i0 94.678 99.6825842696629 357 17 100 2 1 356 3436 3081 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 35487 553 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
3115996 3115996 PRJNA591127_P_NODE_21883_length_189_cov_2.072368_g21714_i0 PRJNA591127 21883 189 2.072368 3.91677552 Naegleria clarki 36333 Heterolobosea other_Eukaryota 350 5.14e-92   NTclustered gi|2651357780|gb|PP174296.1| 36333 g21714 i0 100 22.3703703703704 189 0 100 0 1 189 2663 2475 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4228 350 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
3116013 3116013 PRJNA591127_P_NODE_24923_length_169_cov_1.250000_g24754_i0 PRJNA591127 24923 169 1.25 2.1125 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 195 2.22e-45   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g24754 i0 95.833 38.4674556213018 120 5 71 0 1 120 4543 4424 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6501 195 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
3690356 3690356 PRJNA591127_P_NODE_6863_length_281_cov_3.303279_g6695_i0 PRJNA591127 6863 281 3.303279 9.28221399 Naegleria 5761 Heterolobosea other_Eukaryota 520 5.909999999999999e-143   NTclustered gi|38606345|gb|AY376153.1| 5762 g6695 i0 100 35.9537366548043 281 0 100 0 1 281 214 494 Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 10103 520 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8218290 8218290 PRJNA591127_P_NODE_27947_length_154_cov_1.837607_g27778_i0 PRJNA591127 27947 154 1.837607 2.82991478 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 285 1.14e-72   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g27778 i0 100 100.201298701299 154 0 100 0 1 154 2943 3096 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15431 285 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
9493504 9493504 PRJNA591127_P_NODE_27448_length_156_cov_2.932773_g27279_i0 PRJNA591127 27448 156 2.932773 4.57512588 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 193 7.259999999999999e-45   NTclustered gi|2031939004|emb|OD957472.1| 5763 g27279 i0 88.372 15.9551282051282 172 4 100 1 1 156 275 104 Naegleria fowleri Karachi_NF001 strain blastn 2489 193 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
10067219 10067219 PRJNA591127_P_NODE_12168_length_211_cov_1.793103_g11999_i0 PRJNA591127 12168 211 1.793103 3.78344733 Naegleria 5761 Heterolobosea other_Eukaryota 390 3.459999999999999e-104   NTclustered gi|2618963742|gb|OR769034.1| 5762 g11999 i0 100 100 211 0 100 0 1 211 253 463 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 21100 390 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10067522 10067522 PRJNA591127_P_NODE_8908_length_246_cov_4.751196_g8740_i0 PRJNA591127 8908 246 4.751196 11.68794216 Naegleria 5761 Heterolobosea other_Eukaryota 455 1.4500000000000002e-123   NTclustered gi|399764194|gb|JQ271705.1| 36333 g8740 i0 100 99.8414634146341 246 0 100 0 1 246 2281 2526 Naegleria clarki strain TMR 18S ribosomal RNA gene, partial sequence blastn 24561 455 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
11342031 11342031 PRJNA591127_P_NODE_12649_length_207_cov_1.194118_g12480_i0 PRJNA591127 12649 207 1.194118 2.47182426 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 366 5.699999999999998e-97   NTclustered gi|89148133|gb|DQ388519.1| 373143 g12480 i0 98.551 22 207 3 100 0 1 207 207 413 Heterolobosea sp. BA 16S small subunit ribosomal RNA gene, partial sequence; and His-Cys box homing endonuclease gene, complete cds blastn 4554 366 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. BA
12044214 12044214 PRJNA591127_P_NODE_26370_length_161_cov_3.104839_g26201_i0 PRJNA591127 26370 161 3.104839 4.99879079 Naegleria clarki 36333 Heterolobosea other_Eukaryota 298 1.56e-76   NTclustered gi|2651357780|gb|PP174296.1| 36333 g26201 i0 100 30.422360248447202 161 0 100 0 1 161 3893 4053 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4898 298 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
12617887 12617887 PRJNA591127_P_NODE_25590_length_165_cov_2.875000_g25421_i0 PRJNA591127 25590 165 2.875 4.74375 Naegleria 5761 Heterolobosea other_Eukaryota 294 2.08e-75   NTclustered gi|38606345|gb|AY376153.1| 5762 g25421 i0 98.788 19.8545454545455 165 2 100 0 1 165 663 499 Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 3276 294 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13319110 13319110 PRJNA591127_P_NODE_3851_length_368_cov_3.504532_g3683_i0 PRJNA591127 3851 368 3.504532 12.89667776 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 399 1.08e-106   NTclustered gi|2031938803|emb|OD957438.1| 5763 g3683 i0 87.536 87.0298913043478 345 43 94 0 8 352 23229 22885 Naegleria fowleri Karachi_NF001 strain blastn 32027 399 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
13892933 13892933 PRJNA591127_P_NODE_5751_length_305_cov_5.395522_g5583_i0 PRJNA591127 5751 305 5.395522 16.4563421 Naegleria 5761 Heterolobosea other_Eukaryota 564 2.95e-156   NTclustered gi|2618963742|gb|OR769034.1| 5762 g5583 i0 100 24.9639344262295 305 0 100 0 1 305 4129 3825 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 7614 564 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16441667 16441667 PRJNA591127_P_NODE_8453_length_253_cov_7.930556_g8285_i0 PRJNA591127 8453 253 7.930556 20.06430668 Naegleria 5761 Heterolobosea other_Eukaryota 468 1.92e-127   NTclustered gi|2618963742|gb|OR769034.1| 5762 g8285 i0 100 10.1818181818182 253 0 100 0 1 253 5497 5749 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2576 468 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17142708 17142708 PRJNA591127_P_NODE_21714_length_190_cov_3.058824_g21545_i0 PRJNA591127 21714 190 3.058824 5.8117656 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 340 3.1099999999999993e-89   NTclustered gi|11466174|ref|NC_002573.1| 5762 g21545 i0 98.947 83.8105263157895 190 2 100 0 1 190 1213 1024 Naegleria gruberi mitochondrion, complete genome blastn 15924 340 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
18990061 18990061 PRJNA591127_P_NODE_1455_length_560_cov_9.984704_g1306_i0 PRJNA591127 1455 560 9.984704 55.9143424 Naegleria 5761 Heterolobosea other_Eukaryota 1035 0   NTclustered gi|2651357780|gb|PP174296.1| 36333 g1306 i0 100 36.3767857142857 560 0 100 0 1 560 2352 1793 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20371 1035 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
18990255 18990255 PRJNA591127_P_NODE_3915_length_365_cov_3.798780_g3747_i0 PRJNA591127 3915 365 3.79878 13.865547 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 63.9 1.6e-5   NTclustered gi|2719226838|gb|PP695237.1| 51637 g3747 i0 100 9.4958904109589 34 0 9 0 212 245 4007 3974 Naegleria lovaniensis strain TS rDNA-containing extrachromosomal element genomic sequence blastn 3466 63.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
19691519 19691519 PRJNA591127_P_NODE_29456_length_151_cov_3.885965_g29287_i0 PRJNA591127 29456 151 3.885965 5.86780715 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 135 1.19e-27   NTclustered gi|290979438|ref|XM_002672395.1| 5762 g29287 i0 83.439 1.03973509933775 157 15 97 1 3 148 2949 3105 Naegleria gruberi WD40 domain-containing protein (NAEGRDRAFT_81189), partial mRNA blastn 157 135 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20967146 20967146 PRJNA591127_P_NODE_12497_length_208_cov_2.081871_g12328_i0 PRJNA591127 12497 208 2.081871 4.33029168 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 130 8.18e-26   NTclustered gi|2031941995|emb|OD958022.1| 5763 g12328 i0 100 0.336538461538462 70 0 34 0 1 70 139 208 Naegleria fowleri Karachi_NF001 strain blastn 70 130 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
20967285 20967285 PRJNA591127_P_NODE_2657_length_434_cov_3.544081_g2490_i0 PRJNA591127 2657 434 3.544081 15.38131154 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 728 0   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g2490 i0 96.998 15.0898617511521 433 13 99 0 2 434 2338 1906 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6549 728 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
24791269 24791269 PRJNA591127_P_NODE_25780_length_164_cov_2.795276_g25611_i0 PRJNA591127 25780 164 2.795276 4.58425264 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 276 7.46e-70   NTclustered gi|11466174|ref|NC_002573.1| 5762 g25611 i0 96.951 8.12804878048781 164 5 100 0 1 164 1578 1741 Naegleria gruberi mitochondrion, complete genome blastn 1333 276 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
24791298 24791298 PRJNA591127_P_NODE_29720_length_151_cov_3.526316_g29551_i0 PRJNA591127 29720 151 3.526316 5.32473716 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 174 2.52e-39   NTclustered gi|11466174|ref|NC_002573.1| 5762 g29551 i0 87.421 1.05298013245033 159 11 99 1 1 150 211 369 Naegleria gruberi mitochondrion, complete genome blastn 159 174 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;