RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA591127" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA591127 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8218342 8218342 PRJNA591127_P_NODE_3467_length_386_cov_2.693410_g3299_i0 PRJNA591127 3467 386 2.69341 10.3965626 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 207 7.43e-49   NTclustered gi|2874254000|emb|OY970325.1| 157466 g3299 i0 92 311.836787564767 150 9 39 3 6 154 1305219 1305366 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 120369 207 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
18416825 18416825 PRJNA591127_P_NODE_12155_length_211_cov_2.356322_g11986_i0 PRJNA591127 12155 211 2.356322 4.97183942 Capsulimonas corticalis 2219043 Bacteria Bacteria 193 1.05e-44   NTclustered gi|2240447379|dbj|AP025739.1| 2219043 g11986 i0 84.541 147.781990521327 207 18 96 11 9 211 593459 593263 Capsulimonas corticalis AX-7 DNA, complete genome blastn 31182 193 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis
24791347 24791347 PRJNA591127_P_NODE_540_length_828_cov_16.093552_g448_i0 PRJNA591127 540 828 16.093552 133.25461056 uncultured Armatimonadetes bacterium 157466 Bacteria Bacteria 549 2.419999999999999e-151   NTclustered gi|2874254000|emb|OY970325.1| 157466 g448 i0 81.267 342.091787439614 726 95 85 29 1 704 1306507 1305801 MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 blastn 283252 549 1 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;