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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA591127" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 6 ✖

bioproject 1

  • PRJNA591127 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1138670 1138670 PRJNA591127_P_NODE_13521_length_200_cov_1.644172_g13352_i0 PRJNA591127 13521 200 1.644172 3.288344 Thermoproteati 1783275 Archaea Archaea 370 4.22e-98   NTclustered gi|22797874|emb|AJ496176.1| 29281 g13352 i0 100 21.63 200 0 100 0 1 200 7055 7254 Uncultured crenarchaeote 34 kb genomic fragment blastn 4326 370 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
3115885 3115885 PRJNA591127_P_NODE_10423_length_228_cov_2.319372_g10255_i0 PRJNA591127 10423 228 2.319372 5.28816816 Candidatus Nitrosocosmicus arcticus 2035267 Archaea Archaea 403 4.87e-108   NTclustered gi|1241355791|gb|KX863713.1| 2035267 g10255 i0 98.678 67.3201754385965 227 3 99 0 1 227 2156 2382 Candidatus Nitrosocosmicus arcticus 23S ribosomal RNA gene, partial sequence blastn 15349 403 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus arcticus
8218396 8218396 PRJNA591127_P_NODE_9987_length_233_cov_1.576531_g9819_i0 PRJNA591127 9987 233 1.576531 3.67331723 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 425 1.07e-114   NTclustered gi|937513727|gb|CP012850.1| 1353260 g9819 i0 99.571 20.1630901287554 233 1 100 0 1 233 848237 848469 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 4698 425 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
20265160 20265160 PRJNA591127_P_NODE_11856_length_214_cov_2.497175_g11687_i0 PRJNA591127 11856 214 2.497175 5.3439545 root 1 Root_unresolved Root_unresolved 396 7.559999999999996e-106   NTclustered gi|146142099|gb|EF522603.1| 29281 g11687 i0 100 100.004672897196 214 0 100 0 1 214 146 359 Uncultured crenarchaeote clone SCGR110 16S ribosomal RNA gene, partial sequence blastn 21401 396 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
21540776 21540776 PRJNA591127_P_NODE_2817_length_423_cov_1.878238_g2650_i0 PRJNA591127 2817 423 1.878238 7.94494674 root 1 Root_unresolved Root_unresolved 782 0   NTclustered gi|82618470|gb|DQ278118.1| 29281 g2650 i0 100 103.992907801418 423 0 100 0 1 423 1243 821 Uncultured crenarchaeote clone OdenA-100ii 16S ribosomal RNA gene, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequence blastn 43989 782 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
22242098 22242098 PRJNA591127_P_NODE_12758_length_206_cov_1.431953_g12589_i0 PRJNA591127 12758 206 1.431953 2.94982318 Candidatus Nitrosocosmicus hydrocola 1826872 Archaea Archaea 370 4.38e-98   NTclustered gi|1100598057|gb|CP017922.1| 1826872 g12589 i0 99.029 29.7038834951456 206 2 100 0 1 206 1790289 1790494 Candidatus Nitrosocosmicus hydrocola strain G61, complete genome blastn 6119 370 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus hydrocola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;