contig_metadata
74 rows where analysis = "blastn", bioproject = "PRJNA591000" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 564960 | 564960 | PRJNA591000_P_NODE_1181_length_1082_cov_8.380817_g833_i0 | PRJNA591000 | 1181 | 1082 | 8.380817 | 90.68043994 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 898 | 0 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g833 | i0 | 98.619 | 60.9667282809612 | 507 | 7 | 95 | 0 | 505 | 1011 | 3696381 | 3696887 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 65966 | 898 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 564961 | 564961 | PRJNA591000_P_NODE_12241_length_415_cov_1.090674_g10655_i0 | PRJNA591000 | 12241 | 415 | 1.090674 | 4.5262971 | Ralstonia pickettii | 329 | Bacteria | Bacteria | 124 | 8.339999999999998e-24 | NTclustered | gi|2556948084|gb|CP104382.1| | 329 | g10655 | i0 | 97.26 | 14.8530120481928 | 73 | 2 | 42 | 0 | 60 | 132 | 231254 | 231326 | Ralstonia pickettii strain MCR chromosome 2, complete sequence | blastn | 6164 | 124 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia pickettii | ||
| 564967 | 564967 | PRJNA591000_P_NODE_3981_length_725_cov_2.370690_g3128_i0 | PRJNA591000 | 3981 | 725 | 2.37069 | 17.1875025 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 850 | 0 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g3128 | i0 | 98.545 | 48.3241379310345 | 481 | 7 | 100 | 0 | 1 | 481 | 48676 | 49156 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 35035 | 850 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 1138601 | 1138601 | PRJNA591000_P_NODE_10741_length_433_cov_22.061881_g9165_i0 | PRJNA591000 | 10741 | 433 | 22.061881 | 95.52794473 | Escherichia | 561 | Bacteria | Bacteria | 752 | 0 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g9165 | i0 | 99.756 | 653.401847575058 | 410 | 1 | 95 | 0 | 12 | 421 | 4031175 | 4031584 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 282923 | 752 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 1138603 | 1138603 | PRJNA591000_P_NODE_16581_length_157_cov_12.742188_g14975_i0 | PRJNA591000 | 16581 | 157 | 12.742188 | 20.00523516 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 267 | 4.25e-67 | NTclustered | gi|2841922414|gb|CP163901.1| | 562 | g14975 | i0 | 100 | 582.484076433121 | 144 | 0 | 92 | 0 | 1 | 144 | 3006919 | 3006776 | Escherichia coli strain OXEC-129 chromosome, complete genome | blastn | 91450 | 267 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 1138607 | 1138607 | PRJNA591000_P_NODE_7161_length_523_cov_17.580972_g5730_i0 | PRJNA591000 | 7161 | 523 | 17.580972 | 91.94848356 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 385 | 4.45e-102 | NTclustered | gi|2484936936|gb|OQ808021.1| | 306 | g5730 | i0 | 98.182 | 47.2906309751434 | 220 | 4 | 42 | 0 | 304 | 523 | 62 | 281 | Pseudomonas sp. strain IMCC39330 16S ribosomal RNA gene, partial sequence | blastn | 24733 | 385 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. | ||
| 1840473 | 1840473 | PRJNA591000_P_NODE_10782_length_433_cov_1.445545_g9206_i0 | PRJNA591000 | 10782 | 433 | 1.445545 | 6.25920985 | Methylorubrum populi | 223967 | Bacteria | Bacteria | 267 | 1.3699999999999998e-66 | NTclustered | gi|179342784|gb|CP001029.1| | 441620 | g9206 | i0 | 100 | 5.72055427251732 | 144 | 0 | 62 | 0 | 1 | 144 | 171167 | 171024 | Methylobacterium populi BJ001, complete genome | blastn | 2477 | 267 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylorubrum | Methylorubrum populi | ||
| 1840475 | 1840475 | PRJNA591000_P_NODE_12042_length_417_cov_2.033505_g10456_i0 | PRJNA591000 | 12042 | 417 | 2.033505 | 8.47971585 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 202 | 3.76e-47 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g10456 | i0 | 99.107 | 7.54196642685851 | 112 | 1 | 40 | 0 | 264 | 375 | 3275124 | 3275235 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 3145 | 202 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 2414016 | 2414016 | PRJNA591000_P_NODE_14822_length_383_cov_3.508475_g13220_i0 | PRJNA591000 | 14822 | 383 | 3.508475 | 13.43745925 | Hydrogenophaga | 47420 | Bacteria | Bacteria | 172 | 2.69e-38 | NTclustered | gi|2812489778|gb|CP159956.1| | 3166645 | g13220 | i0 | 88.356 | 7.38903394255875 | 146 | 13 | 38 | 3 | 1 | 144 | 4553005 | 4552862 | Hydrogenophaga sp. ANAO-22 chromosome, complete genome | blastn | 2830 | 172 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Hydrogenophaga | Hydrogenophaga sp. ANAO-22 | ||
| 2414017 | 2414017 | PRJNA591000_P_NODE_1582_length_980_cov_1.241851_g1137_i0 | PRJNA591000 | 1582 | 980 | 1.241851 | 12.1701398 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 357 | 1.88e-93 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g1137 | i0 | 100 | 56.4265306122449 | 193 | 0 | 56 | 0 | 788 | 980 | 3252760 | 3252568 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 55298 | 357 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 3115852 | 3115852 | PRJNA591000_P_NODE_13203_length_404_cov_1.058667_g11613_i0 | PRJNA591000 | 13203 | 404 | 1.058667 | 4.27701468 | Xanthomonas sp. CFBP 8443 | 2971235 | Bacteria | Bacteria | 52.8 | 0.039 | NTclustered | gi|2315968508|gb|CP102592.1| | 2971235 | g11613 | i0 | 100 | 0.0693069306930693 | 28 | 0 | 7 | 0 | 22 | 49 | 257862 | 257889 | Xanthomonas sp. CFBP 8443 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Xanthomonas | Xanthomonas sp. CFBP 8443 | ||
| 3115855 | 3115855 | PRJNA591000_P_NODE_14723_length_385_cov_1.266854_g13121_i0 | PRJNA591000 | 14723 | 385 | 1.266854 | 4.8773879000000004 | Polynucleobacter difficilis | 556054 | Bacteria | Bacteria | 185 | 3.469999999999999e-42 | NTclustered | gi|1380345983|gb|CP023276.1| | 556054 | g13121 | i0 | 94.215 | 0.314285714285714 | 121 | 7 | 31 | 0 | 1 | 121 | 1542961 | 1543081 | Polynucleobacter difficilis strain AM-8B5 chromosome, complete genome | blastn | 121 | 185 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Polynucleobacter | Polynucleobacter difficilis | ||
| 3115857 | 3115857 | PRJNA591000_P_NODE_2643_length_828_cov_51.790989_g1987_i0 | PRJNA591000 | 2643 | 828 | 51.790989 | 428.82938892 | Curvibacter gracilis | 230310 | Bacteria | Bacteria | 1352 | 0 | NTclustered | gi|1020738215|emb|LT555974.1| | 230310 | g1987 | i0 | 96.149 | 322.780193236715 | 831 | 27 | 100 | 5 | 1 | 828 | 468 | 1296 | Curvibacter gracilis partial 23S rRNA gene, strain 7-1 | blastn | 267262 | 1352 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Curvibacter | Curvibacter gracilis | ||
| 3115858 | 3115858 | PRJNA591000_P_NODE_2683_length_825_cov_9.582915_g2023_i0 | PRJNA591000 | 2683 | 825 | 9.582915 | 79.05904875 | Ahniella affigens | 2021234 | Bacteria | Bacteria | 69.4 | 8.24e-7 | NTclustered | gi|1370147327|gb|CP027860.1| | 2021234 | g2023 | i0 | 81.319 | 2.42181818181818 | 91 | 12 | 22 | 4 | 203 | 291 | 3203941 | 3204028 | Ahniella affigens strain D13 chromosome, complete genome | blastn | 1998 | 69.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Rhodanobacteraceae | Ahniella | Ahniella affigens | ||
| 4392432 | 4392432 | PRJNA591000_P_NODE_13484_length_401_cov_0.938172_g11892_i0 | PRJNA591000 | 13484 | 401 | 0.938172 | 3.76206972 | Methylobacterium radiodurans | 2202828 | Bacteria | Bacteria | 130 | 1.73e-25 | NTclustered | gi|1393171907|gb|CP029551.1| | 2202828 | g11892 | i0 | 96.203 | 7.85785536159601 | 79 | 3 | 20 | 0 | 1 | 79 | 1347903 | 1347825 | Methylobacterium radiodurans strain 17Sr1-43 chromosome, complete genome | blastn | 3151 | 130 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiodurans | ||
| 4392433 | 4392433 | PRJNA591000_P_NODE_13764_length_397_cov_3.546196_g12172_i0 | PRJNA591000 | 13764 | 397 | 3.546196 | 14.07839812 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 451 | 3.21e-122 | NTclustered | gi|2622018444|gb|CP138513.1| | 34073 | g12172 | i0 | 88.205 | 135.115869017632 | 390 | 30 | 94 | 7 | 22 | 396 | 4506197 | 4505809 | Variovorax paradoxus strain SPNA7 chromosome, complete genome | blastn | 53641 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 4392434 | 4392434 | PRJNA591000_P_NODE_15504_length_299_cov_4.496296_g13898_i0 | PRJNA591000 | 15504 | 299 | 4.496296 | 13.44392504 | Diaphorobacter aerolatus | 1288495 | Bacteria | Bacteria | 488 | 1.7899999999999996e-133 | NTclustered | gi|1899469430|gb|CP060783.1| | 1288495 | g13898 | i0 | 96.918 | 1.33444816053512 | 292 | 8 | 98 | 1 | 1 | 292 | 4724806 | 4725096 | Diaphorobacter aerolatus strain KACC 16536 chromosome, complete genome | blastn | 399 | 488 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Diaphorobacter | Diaphorobacter aerolatus | ||
| 4392436 | 4392436 | PRJNA591000_P_NODE_2044_length_902_cov_4.650630_g1510_i0 | PRJNA591000 | 2044 | 902 | 4.65063 | 41.9486826 | Microvirga terrae | 2740529 | Bacteria | Bacteria | 60.2 | 5.44e-4 | NTclustered | gi|2293382578|gb|CP102845.1| | 2740529 | g1510 | i0 | 94.737 | 0.0842572062084257 | 38 | 2 | 8 | 0 | 17 | 54 | 2902753 | 2902790 | Microvirga terrae strain R24 chromosome, complete genome | blastn | 76 | 60.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Microvirga | Microvirga terrae | ||
| 4392437 | 4392437 | PRJNA591000_P_NODE_3804_length_735_cov_30.029745_g2977_i0 | PRJNA591000 | 3804 | 735 | 30.029745 | 220.71862575 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 719 | 0 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g2977 | i0 | 99.002 | 19.1510204081633 | 401 | 4 | 95 | 0 | 20 | 420 | 4289541 | 4289941 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 14076 | 719 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 4966746 | 4966746 | PRJNA591000_P_NODE_15484_length_308_cov_10.340502_g13878_i0 | PRJNA591000 | 15484 | 308 | 10.340502 | 31.84874616 | Moraxellaceae | 468 | Bacteria | Bacteria | 394 | 4.15e-105 | NTclustered | gi|1278991277|gb|CP024180.2| | 34062 | g13878 | i0 | 90.816 | 433.016233766234 | 294 | 27 | 95 | 0 | 15 | 308 | 1670520 | 1670813 | Moraxella osloensis strain KSH chromosome, complete genome | blastn | 133369 | 394 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 5668666 | 5668666 | PRJNA591000_P_NODE_13845_length_396_cov_6.108992_g12250_i0 | PRJNA591000 | 13845 | 396 | 6.108992 | 24.19160832 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 531 | 3.9899999999999997e-146 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g12250 | i0 | 99.317 | 33.8383838383838 | 293 | 2 | 86 | 0 | 104 | 396 | 193251 | 192959 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 13400 | 531 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 5668671 | 5668671 | PRJNA591000_P_NODE_5765_length_602_cov_44.472949_g4541_i0 | PRJNA591000 | 5765 | 602 | 44.472949 | 267.72715298 | Psychrobacter sp. WY6 | 2708350 | Bacteria | Bacteria | 1085 | 0 | NTclustered | gi|2043521576|gb|CP049902.1| | 2708350 | g4541 | i0 | 99.169 | 482.885382059801 | 602 | 5 | 100 | 0 | 1 | 602 | 383912 | 384513 | Psychrobacter sp. WY6 chromosome, complete genome | blastn | 290697 | 1085 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Psychrobacter | Psychrobacter sp. WY6 | ||
| 6242269 | 6242269 | PRJNA591000_P_NODE_15845_length_201_cov_5.232558_g14239_i0 | PRJNA591000 | 15845 | 201 | 5.232558 | 10.51744158 | Roseomonas | 125216 | Bacteria | Bacteria | 248 | 2.08e-61 | NTclustered | gi|2329626551|gb|CP034924.1| | 207340 | g14239 | i0 | 100 | 289.661691542289 | 134 | 0 | 100 | 0 | 68 | 201 | 218087 | 217954 | Roseomonas mucosa strain HV1 chromosome, complete genome | blastn | 58222 | 248 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Acetobacterales | Roseomonadaceae | Roseomonas | Roseomonas mucosa | ||
| 6242270 | 6242270 | PRJNA591000_P_NODE_16165_length_174_cov_6.324138_g14559_i0 | PRJNA591000 | 16165 | 174 | 6.324138 | 11.00400012 | Psychrobacter | 497 | Bacteria | Bacteria | 300 | 4.73e-77 | NTclustered | gi|2043521576|gb|CP049902.1| | 2708350 | g14559 | i0 | 100 | 342.954022988506 | 162 | 0 | 93 | 0 | 1 | 162 | 383934 | 383773 | Psychrobacter sp. WY6 chromosome, complete genome | blastn | 59674 | 300 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Psychrobacter | Psychrobacter sp. WY6 | ||
| 6943099 | 6943099 | PRJNA591000_P_NODE_7026_length_530_cov_1.812375_g5616_i0 | PRJNA591000 | 7026 | 530 | 1.812375 | 9.6055875 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 346 | 2.13e-90 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g5616 | i0 | 99.474 | 8.35660377358491 | 190 | 1 | 70 | 0 | 341 | 530 | 707272 | 707461 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 4429 | 346 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 6943100 | 6943100 | PRJNA591000_P_NODE_8466_length_478_cov_1.541203_g6945_i0 | PRJNA591000 | 8466 | 478 | 1.541203 | 7.36695034 | Polynucleobacter sp. MWH-CaK5 | 2689107 | Bacteria | Bacteria | 346 | 1.91e-90 | NTclustered | gi|2047830082|gb|CP061299.1| | 2689107 | g6945 | i0 | 99.474 | 0.853556485355649 | 190 | 1 | 63 | 0 | 1 | 190 | 662952 | 663141 | Polynucleobacter sp. MWH-CaK5 chromosome, complete genome | blastn | 408 | 346 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Polynucleobacter | Polynucleobacter sp. MWH-CaK5 | ||
| 7516474 | 7516474 | PRJNA591000_P_NODE_1566_length_981_cov_12.970588_g1126_i0 | PRJNA591000 | 1566 | 981 | 12.970588 | 127.24146828 | Variovorax | 34072 | Bacteria | Bacteria | 1055 | 0 | NTclustered | gi|2741137698|dbj|AP028659.1| | 3065952 | g1126 | i0 | 88.209 | 61.1804281345566 | 899 | 87 | 91 | 6 | 13 | 902 | 4707904 | 4707016 | Variovorax sp. V15 DNA, complete genome | blastn | 60018 | 1061 | 0.994344957587182 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax sp. V15 | ||
| 7516475 | 7516475 | PRJNA591000_P_NODE_15886_length_198_cov_2.207101_g14280_i0 | PRJNA591000 | 15886 | 198 | 2.207101 | 4.37005998 | Cyanobacteriota/Melainabacteria group | 1798711 | Bacteria | Bacteria | 78.7 | 2.83e-10 | NTclustered | gi|2442619374|gb|CP117193.1| | 80878 | g14280 | i0 | 92.593 | 1.90909090909091 | 54 | 4 | 27 | 0 | 129 | 182 | 1833830 | 1833883 | Acidovorax temperans strain LMJ chromosome, complete genome | blastn | 378 | 78.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Acidovorax | Acidovorax temperans | ||
| 8791423 | 8791423 | PRJNA591000_P_NODE_15447_length_323_cov_5.836735_g13841_i0 | PRJNA591000 | 15447 | 323 | 5.836735 | 18.85265405 | Pseudomonas | 286 | Bacteria | Bacteria | 518 | 2.49e-142 | NTclustered | gi|2778973115|gb|CP162335.1| | 287 | g13841 | i0 | 96.203 | 368.547987616099 | 316 | 12 | 98 | 0 | 1 | 316 | 6199564 | 6199879 | Pseudomonas aeruginosa strain 1001d0_1 chromosome, complete genome | blastn | 119041 | 518 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 8791425 | 8791425 | PRJNA591000_P_NODE_1707_length_956_cov_10.221143_g1231_i0 | PRJNA591000 | 1707 | 956 | 10.221143 | 97.71412708 | Pseudomonadota | 1224 | Bacteria | Bacteria | 870 | 0 | NTclustered | gi|2179802874|gb|CP054791.1| | 287 | g1231 | i0 | 100 | 100.366108786611 | 471 | 0 | 97 | 0 | 430 | 900 | 4040903 | 4040433 | Pseudomonas aeruginosa strain SE5430 chromosome, complete genome | blastn | 95950 | 870 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 9493335 | 9493335 | PRJNA591000_P_NODE_13728_length_398_cov_1.081301_g12136_i0 | PRJNA591000 | 13728 | 398 | 1.081301 | 4.30357798 | Psychrobacter sp. WB2 | 256325 | Bacteria | Bacteria | 176 | 2.17e-39 | NTclustered | gi|2500968524|gb|CP124526.1| | 3043330 | g12136 | i0 | 98.98 | 0.761306532663317 | 98 | 1 | 45 | 0 | 4 | 101 | 1813535 | 1813632 | Psychrobacter sp. WB2 chromosome, complete genome | blastn | 303 | 176 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Psychrobacter | Psychrobacter sp. WB2 | ||
| 9493340 | 9493340 | PRJNA591000_P_NODE_2268_length_874_cov_1.501775_g1689_i0 | PRJNA591000 | 2268 | 874 | 1.501775 | 13.1255135 | beta proteobacterium CB | 543913 | Bacteria | Bacteria | 185 | 8.33e-42 | NTclustered | gi|455439634|gb|CP004348.1| | 543913 | g1689 | i0 | 84.492 | 0.47254004576659 | 187 | 29 | 21 | 0 | 325 | 511 | 2552 | 2366 | Beta proteobacterium CB, complete genome | blastn | 413 | 185 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | beta proteobacterium CB | |||||
| 10067176 | 10067176 | PRJNA591000_P_NODE_14988_length_380_cov_1.829060_g13385_i0 | PRJNA591000 | 14988 | 380 | 1.82906 | 6.950428 | Variovorax | 34072 | Bacteria | Bacteria | 122 | 2.72e-23 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g13385 | i0 | 100 | 34.2157894736842 | 66 | 0 | 34 | 0 | 16 | 81 | 210925 | 210860 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 13002 | 122 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 10067178 | 10067178 | PRJNA591000_P_NODE_15988_length_186_cov_14.770701_g14382_i0 | PRJNA591000 | 15988 | 186 | 14.770701 | 27.47350386 | root | 1 | Root_unresolved | Root_unresolved | 344 | 2.34e-90 | NTclustered | gi|1845047451|gb|MT509853.1| | 729 | g14382 | i0 | 100 | 100 | 186 | 0 | 100 | 0 | 1 | 186 | 491 | 676 | Haemophilus parainfluenzae strain KCOM 3393 (=ChDC P012-Td1) 16S ribosomal RNA gene, partial sequence | blastn | 18600 | 344 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | Haemophilus parainfluenzae | ||
| 10769210 | 10769210 | PRJNA591000_P_NODE_10309_length_440_cov_1.583942_g8739_i0 | PRJNA591000 | 10309 | 440 | 1.583942 | 6.9693448 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 296 | 1.78e-75 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g8739 | i0 | 100 | 24.4590909090909 | 160 | 0 | 46 | 0 | 281 | 440 | 255343 | 255184 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 10762 | 296 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 11341961 | 11341961 | PRJNA591000_P_NODE_1009_length_1134_cov_27.374661_g696_i0 | PRJNA591000 | 1009 | 1134 | 27.374661 | 310.42865574 | Delftia | 80865 | Bacteria | Bacteria | 429 | 4.569999999999999e-115 | NTclustered | gi|1134452940|gb|CP019171.1| | 80866 | g696 | i0 | 80.207 | 83.6287477954145 | 581 | 107 | 92 | 8 | 41 | 617 | 2822086 | 2822662 | Delftia acidovorans isolate ANG1, complete genome | blastn | 94835 | 429 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Delftia | Delftia acidovorans | ||
| 11341970 | 11341970 | PRJNA591000_P_NODE_8569_length_475_cov_1.941704_g7042_i0 | PRJNA591000 | 8569 | 475 | 1.941704 | 9.223094 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 357 | 8.75e-94 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g7042 | i0 | 100 | 75.1578947368421 | 193 | 0 | 75 | 0 | 283 | 475 | 3252760 | 3252568 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 35700 | 357 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 12617695 | 12617695 | PRJNA591000_P_NODE_11810_length_420_cov_1.020460_g10224_i0 | PRJNA591000 | 11810 | 420 | 1.02046 | 4.285932 | Variovorax | 34072 | Bacteria | Bacteria | 244 | 6.22e-60 | NTclustered | gi|2189435386|gb|CP091716.1| | 34073 | g10224 | i0 | 95.425 | 9.36428571428571 | 153 | 7 | 36 | 0 | 1 | 153 | 2456703 | 2456855 | Variovorax paradoxus strain IPSP_MA_2 chromosome | blastn | 3933 | 244 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 12617698 | 12617698 | PRJNA591000_P_NODE_16390_length_164_cov_3.488889_g14784_i0 | PRJNA591000 | 16390 | 164 | 3.488889 | 5.72177796 | root | 1 | Root_unresolved | Root_unresolved | 303 | 3.42e-78 | NTclustered | gi|601039675|gb|KJ023362.1| | 484 | g14784 | i0 | 100 | 100 | 164 | 0 | 100 | 0 | 1 | 164 | 86 | 249 | Neisseria flavescens strain P216 16S ribosomal RNA gene, partial sequence | blastn | 16400 | 303 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | Neisseria flavescens | ||
| 15166718 | 15166718 | PRJNA591000_P_NODE_16192_length_173_cov_9.701389_g14586_i0 | PRJNA591000 | 16192 | 173 | 9.701389 | 16.78340297 | Pseudomonadaceae | 135621 | Bacteria | Bacteria | 285 | 1.32e-72 | NTclustered | gi|526641964|ref|NR_103961.1| | 53412 | g14586 | i0 | 100 | 543.028901734104 | 154 | 0 | 89 | 0 | 1 | 154 | 2727 | 2880 | Pseudomonas resinovorans strain CA10 23S ribosomal RNA gene, complete sequence | blastn | 93944 | 285 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Metapseudomonas | Metapseudomonas resinovorans | ||
| 15166720 | 15166720 | PRJNA591000_P_NODE_752_length_1237_cov_3.987583_g516_i0 | PRJNA591000 | 752 | 1237 | 3.987583 | 49.32640171 | Bacteria | 2 | Bacteria | Bacteria | 1205 | 0 | NTclustered | gi|1384513437|gb|CP029148.1| | 287 | g516 | i0 | 99.847 | 133.961196443007 | 655 | 1 | 100 | 0 | 1 | 655 | 1494997 | 1495651 | Pseudomonas aeruginosa strain AR_0440 chromosome | blastn | 165710 | 1205 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 15867601 | 15867601 | PRJNA591000_P_NODE_2013_length_908_cov_1.822526_g1486_i0 | PRJNA591000 | 2013 | 908 | 1.822526 | 16.54853608 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 326 | 4.89e-84 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g1486 | i0 | 98.901 | 43.0099118942731 | 182 | 2 | 62 | 0 | 727 | 908 | 1802417 | 1802598 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 39053 | 326 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 15867602 | 15867602 | PRJNA591000_P_NODE_6593_length_550_cov_4.437620_g5226_i0 | PRJNA591000 | 6593 | 550 | 4.43762 | 24.40691 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 730 | 0 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g5226 | i0 | 99.501 | 44.9472727272727 | 401 | 2 | 100 | 0 | 1 | 401 | 588203 | 587803 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 24721 | 730 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 16441345 | 16441345 | PRJNA591000_P_NODE_10613_length_435_cov_6.445813_g9039_i0 | PRJNA591000 | 10613 | 435 | 6.445813 | 28.03928655 | root | 1 | Root_unresolved | Root_unresolved | 372 | 2.84e-98 | NTclustered | gi|2514065373|gb|CP122496.1| | 562 | g9039 | i0 | 99.51 | 119.347126436782 | 204 | 1 | 57 | 0 | 1 | 204 | 447505 | 447708 | Escherichia coli strain a7 chromosome, complete genome | blastn | 51916 | 372 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 16441348 | 16441348 | PRJNA591000_P_NODE_16433_length_163_cov_1.410448_g14827_i0 | PRJNA591000 | 16433 | 163 | 1.410448 | 2.29903024 | Escherichia | 561 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2023981091|gb|CP072662.1| | 562 | g14827 | i0 | 100 | 100 | 163 | 0 | 100 | 0 | 1 | 163 | 2110896 | 2111058 | Escherichia coli strain BW25113 frmA KO chromosome | blastn | 16300 | 302 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 17142569 | 17142569 | PRJNA591000_P_NODE_11654_length_422_cov_0.791349_g10073_i0 | PRJNA591000 | 11654 | 422 | 0.791349 | 3.33949278 | Stenotrophomonas maltophilia | 40324 | Bacteria | Bacteria | 206 | 2.9499999999999995e-48 | NTclustered | gi|1767334407|dbj|AP021867.1| | 40324 | g10073 | i0 | 97.5 | 40.2085308056872 | 120 | 3 | 41 | 0 | 1 | 120 | 3057264 | 3057383 | Stenotrophomonas maltophilia KMM 349 DNA, complete genome | blastn | 16968 | 206 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas maltophilia | ||
| 17142571 | 17142571 | PRJNA591000_P_NODE_16154_length_175_cov_2.883562_g14548_i0 | PRJNA591000 | 16154 | 175 | 2.883562 | 5.0462335 | Sphingomonas kaistensis | 298708 | Bacteria | Bacteria | 318 | 1.32e-82 | NTclustered | gi|2688290521|gb|CP145607.1| | 298708 | g14548 | i0 | 99.429 | 145.017142857143 | 175 | 1 | 100 | 0 | 1 | 175 | 852173 | 851999 | Sphingomonas kaistensis strain MA4R chromosome, complete genome | blastn | 25378 | 318 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas kaistensis | ||
| 17142572 | 17142572 | PRJNA591000_P_NODE_3454_length_761_cov_2.087432_g2682_i0 | PRJNA591000 | 3454 | 761 | 2.087432 | 15.88535752 | Methylobacterium currus | 2051553 | Bacteria | Bacteria | 152 | 7.319999999999999e-32 | NTclustered | gi|1379147609|gb|CP028844.1| | 2051553 | g2682 | i0 | 82.941 | 0.438896189224704 | 170 | 28 | 26 | 1 | 330 | 499 | 669899 | 669731 | Methylobacterium currus strain PR1016A chromosome 2 | blastn | 334 | 152 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium currus | ||
| 17142576 | 17142576 | PRJNA591000_P_NODE_54_length_2291_cov_10.279841_g39_i0 | PRJNA591000 | 54 | 2291 | 10.279841 | 235.51115731 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 2013 | 0 | NTclustered | gi|2921529653|gb|CP157635.1| | 34073 | g39 | i0 | 98.016 | 1.92186817983413 | 1159 | 23 | 100 | 0 | 1133 | 2291 | 370694 | 371852 | Variovorax paradoxus strain 110B chromosome 2, complete sequence | blastn | 4403 | 2013 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 17142577 | 17142577 | PRJNA591000_P_NODE_5794_length_600_cov_7.964974_g4564_i0 | PRJNA591000 | 5794 | 600 | 7.964974 | 47.789844 | Polynucleobacter corsicus | 2081042 | Bacteria | Bacteria | 686 | 0 | NTclustered | gi|2047859875|gb|CP061314.1| | 2081042 | g4564 | i0 | 90 | 23.0466666666667 | 530 | 53 | 88 | 0 | 69 | 598 | 1691272 | 1691801 | Polynucleobacter corsicus strain AP-Melu-1000-A1 chromosome, complete genome | blastn | 13828 | 686 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Polynucleobacter | Polynucleobacter corsicus | ||
| 17142579 | 17142579 | PRJNA591000_P_NODE_7134_length_525_cov_2.185484_g5706_i0 | PRJNA591000 | 7134 | 525 | 2.185484 | 11.473791 | Polynucleobacter asymbioticus | 576611 | Bacteria | Bacteria | 695 | 0 | NTclustered | gi|2047826365|gb|CP061297.1| | 576611 | g5706 | i0 | 94.105 | 6.01333333333333 | 458 | 26 | 96 | 1 | 1 | 457 | 240373 | 239916 | Polynucleobacter asymbioticus strain MWH-MoIso1 chromosome, complete genome | blastn | 3157 | 695 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Polynucleobacter | Polynucleobacter asymbioticus | ||
| 17716496 | 17716496 | PRJNA591000_P_NODE_15934_length_191_cov_5.641975_g14328_i0 | PRJNA591000 | 15934 | 191 | 5.641975 | 10.77617225 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 296 | 6.87e-76 | NTclustered | gi|1735047819|gb|CP041992.1| | 562 | g14328 | i0 | 96.133 | 632.047120418848 | 181 | 7 | 95 | 0 | 1 | 181 | 3834153 | 3833973 | Escherichia coli strain Fis2-e4 chromosome, complete genome | blastn | 120721 | 296 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18416785 | 18416785 | PRJNA591000_P_NODE_6815_length_538_cov_3.168959_g5426_i0 | PRJNA591000 | 6815 | 538 | 3.168959 | 17.04899942 | Polynucleobacter asymbioticus | 576611 | Bacteria | Bacteria | 529 | 2e-145 | NTclustered | gi|2047826365|gb|CP061297.1| | 576611 | g5426 | i0 | 87.805 | 5.84944237918216 | 451 | 55 | 84 | 0 | 1 | 451 | 74462 | 74012 | Polynucleobacter asymbioticus strain MWH-MoIso1 chromosome, complete genome | blastn | 3147 | 529 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Polynucleobacter | Polynucleobacter asymbioticus | ||
| 18989980 | 18989980 | PRJNA591000_P_NODE_16775_length_152_cov_267.300813_g15169_i0 | PRJNA591000 | 16775 | 152 | 267.300813 | 406.29723576 | root | 1 | Root_unresolved | Root_unresolved | 281 | 1.46e-71 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g15169 | i0 | 100 | 238.032894736842 | 152 | 0 | 100 | 0 | 1 | 152 | 4626 | 4475 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 36181 | 281 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 18989981 | 18989981 | PRJNA591000_P_NODE_2675_length_826_cov_3.274780_g2015_i0 | PRJNA591000 | 2675 | 826 | 3.27478 | 27.0496828 | Escherichia | 561 | Bacteria | Bacteria | 1397 | 0 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g2015 | i0 | 99.868 | 97.455205811138 | 759 | 1 | 97 | 0 | 1 | 759 | 1014411 | 1015169 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 80498 | 1397 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 19691330 | 19691330 | PRJNA591000_P_NODE_7556_length_507_cov_20.420502_g6082_i0 | PRJNA591000 | 7556 | 507 | 20.420502 | 103.53194514 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 905 | 0 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g6082 | i0 | 99.597 | 76.5424063116371 | 496 | 2 | 98 | 0 | 12 | 507 | 5415174 | 5414679 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 38807 | 905 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 19691331 | 19691331 | PRJNA591000_P_NODE_8996_length_464_cov_33.275862_g7455_i0 | PRJNA591000 | 8996 | 464 | 33.275862 | 154.39999968 | Paucibacter sediminis | 3019553 | Bacteria | Bacteria | 675 | 0 | NTclustered | gi|2517185782|gb|CP116346.1| | 3019553 | g7455 | i0 | 97.481 | 223.95474137931 | 397 | 6 | 98 | 3 | 1 | 393 | 899467 | 899863 | Paucibacter sediminis strain S2-9 chromosome, complete genome | blastn | 103915 | 675 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Paucibacter sediminis | ||
| 20967099 | 20967099 | PRJNA591000_P_NODE_11257_length_426_cov_3.062972_g9679_i0 | PRJNA591000 | 11257 | 426 | 3.062972 | 13.04826072 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 394 | 5.919999999999998e-105 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g9679 | i0 | 98.655 | 22.8849765258216 | 223 | 1 | 63 | 1 | 186 | 406 | 3171927 | 3171705 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 9749 | 394 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 20967104 | 20967104 | PRJNA591000_P_NODE_1637_length_971_cov_5.324841_g1181_i0 | PRJNA591000 | 1637 | 971 | 5.324841 | 51.70420611 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 845 | 0 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g1181 | i0 | 96.982 | 22.2245108135942 | 497 | 12 | 97 | 1 | 462 | 958 | 4473898 | 4474391 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 21580 | 845 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 20967105 | 20967105 | PRJNA591000_P_NODE_3017_length_796_cov_21.627119_g2301_i0 | PRJNA591000 | 3017 | 796 | 21.627119 | 172.15186724 | Brachymonas wangyanguii | 3130163 | Bacteria | Bacteria | 263 | 3.39e-65 | NTclustered | gi|2858558014|gb|CP173677.1| | 3130163 | g2301 | i0 | 92.432 | 56.7952261306533 | 185 | 12 | 46 | 2 | 543 | 726 | 132858 | 133041 | Brachymonas sp. G13 chromosome, complete genome | blastn | 45209 | 263 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Brachymonas | Brachymonas wangyanguii | ||
| 21540535 | 21540535 | PRJNA591000_P_NODE_14397_length_389_cov_6.227778_g12799_i0 | PRJNA591000 | 14397 | 389 | 6.227778 | 24.22605642 | Haemophilus | 724 | Bacteria | Bacteria | 673 | 0 | NTclustered | gi|1919219530|gb|CP063122.1| | 729 | g12799 | i0 | 99.728 | 542.964010282776 | 367 | 1 | 94 | 0 | 12 | 378 | 428203 | 427837 | Haemophilus parainfluenzae strain M1C125_4 chromosome, complete genome | blastn | 211213 | 673 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | Haemophilus parainfluenzae | ||
| 21540537 | 21540537 | PRJNA591000_P_NODE_4857_length_668_cov_73.674491_g3838_i0 | PRJNA591000 | 4857 | 668 | 73.674491 | 492.14559988 | Escherichia | 561 | Bacteria | Bacteria | 1026 | 0 | NTclustered | gi|1370526478|gb|CP027520.1| | 562 | g3838 | i0 | 94.992 | 681.639221556886 | 659 | 24 | 98 | 6 | 3 | 655 | 3217313 | 3217968 | Escherichia coli strain 89-3506 chromosome | blastn | 455335 | 1026 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 21540538 | 21540538 | PRJNA591000_P_NODE_8957_length_465_cov_9.566514_g7417_i0 | PRJNA591000 | 8957 | 465 | 9.566514 | 44.4842901 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 492 | 2.2499999999999998e-134 | NTclustered | gi|2841668291|gb|CP143771.1| | 550 | g7417 | i0 | 96.622 | 511.384946236559 | 296 | 10 | 64 | 0 | 166 | 461 | 132425 | 132720 | Enterobacter cloacae strain ECC-003 chromosome, complete genome | blastn | 237794 | 492 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter cloacae | ||
| 22242046 | 22242046 | PRJNA591000_P_NODE_12558_length_411_cov_2.068063_g10970_i0 | PRJNA591000 | 12558 | 411 | 2.068063 | 8.49973893 | Ralstonia pickettii | 329 | Bacteria | Bacteria | 147 | 1.76e-30 | NTclustered | gi|1951964774|gb|CP066773.1| | 329 | g10970 | i0 | 100 | 1.57177615571776 | 79 | 0 | 36 | 0 | 1 | 79 | 17463 | 17385 | Ralstonia pickettii strain K-288 plasmid pRP6297_1, complete sequence | blastn | 646 | 147 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia pickettii | ||
| 22242047 | 22242047 | PRJNA591000_P_NODE_15418_length_337_cov_11.012987_g13812_i0 | PRJNA591000 | 15418 | 337 | 11.012987 | 37.11376619 | Psychrobacter sp. WY6 | 2708350 | Bacteria | Bacteria | 590 | 5.449999999999998e-164 | NTclustered | gi|2043521576|gb|CP049902.1| | 2708350 | g13812 | i0 | 99.085 | 412.922848664688 | 328 | 3 | 97 | 0 | 10 | 337 | 385158 | 385485 | Psychrobacter sp. WY6 chromosome, complete genome | blastn | 139155 | 590 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Psychrobacter | Psychrobacter sp. WY6 | ||
| 22815810 | 22815810 | PRJNA591000_P_NODE_4558_length_688_cov_91.100152_g3608_i0 | PRJNA591000 | 4558 | 688 | 91.100152 | 626.76904576 | Pseudomonas | 286 | Bacteria | Bacteria | 907 | 0 | NTclustered | gi|1403366562|emb|LS483372.1| | 294 | g3608 | i0 | 92.744 | 495.575581395349 | 634 | 36 | 92 | 9 | 56 | 686 | 9732 | 10358 | Pseudomonas fluorescens strain NCTC10038 genome assembly, chromosome: 1 | blastn | 340956 | 907 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 23517305 | 23517305 | PRJNA591000_P_NODE_10079_length_443_cov_14.850242_g8515_i0 | PRJNA591000 | 10079 | 443 | 14.850242 | 65.78657206 | Psychrobacter sp. WY6 | 2708350 | Bacteria | Bacteria | 466 | 1.2899999999999999e-126 | NTclustered | gi|2043521576|gb|CP049902.1| | 2708350 | g8515 | i0 | 100 | 542.920993227991 | 252 | 0 | 100 | 0 | 1 | 252 | 385291 | 385542 | Psychrobacter sp. WY6 chromosome, complete genome | blastn | 240514 | 466 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Psychrobacter | Psychrobacter sp. WY6 | ||
| 23517307 | 23517307 | PRJNA591000_P_NODE_3499_length_757_cov_30.171703_g2721_i0 | PRJNA591000 | 3499 | 757 | 30.171703 | 228.39979171 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 1175 | 0 | NTclustered | gi|2921529653|gb|CP157635.1| | 34073 | g2721 | i0 | 98.356 | 1.01188903566711 | 669 | 11 | 100 | 0 | 89 | 757 | 1163864 | 1163196 | Variovorax paradoxus strain 110B chromosome 2, complete sequence | blastn | 766 | 1175 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 24090519 | 24090519 | PRJNA591000_P_NODE_16319_length_167_cov_6.615942_g14713_i0 | PRJNA591000 | 16319 | 167 | 6.615942 | 11.04862314 | Sphingomonadales | 204457 | Bacteria | Bacteria | 276 | 7.64e-70 | NTclustered | gi|1954967672|gb|CP067087.1| | 2798724 | g14713 | i0 | 98.101 | 148.604790419162 | 158 | 3 | 95 | 0 | 10 | 167 | 558828 | 558985 | Croceicoccus sp. YJ47 chromosome, complete genome | blastn | 24817 | 276 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Erythrobacteraceae | Croceicoccus | Croceicoccus sp. YJ47 | ||
| 24090520 | 24090520 | PRJNA591000_P_NODE_6179_length_575_cov_3.642857_g4883_i0 | PRJNA591000 | 6179 | 575 | 3.642857 | 20.94642775 | Variovorax | 34072 | Bacteria | Bacteria | 588 | 3.499999999999999e-163 | NTclustered | gi|2189435386|gb|CP091716.1| | 34073 | g4883 | i0 | 85.487 | 1.96521739130435 | 565 | 80 | 98 | 2 | 12 | 575 | 2383426 | 2383989 | Variovorax paradoxus strain IPSP_MA_2 chromosome | blastn | 1130 | 588 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 24791107 | 24791107 | PRJNA591000_P_NODE_5220_length_644_cov_5.330081_g4110_i0 | PRJNA591000 | 5220 | 644 | 5.330081 | 34.32572164 | Polynucleobacter necessarius | 576610 | Bacteria | Bacteria | 516 | 1.89e-141 | NTclustered | gi|1209183068|emb|LT606947.1| | 576610 | g4110 | i0 | 82.902 | 2.27173913043478 | 579 | 93 | 89 | 5 | 15 | 589 | 1415852 | 1415276 | Polynucleobacter necessarius isolate PPGSP2 genome assembly, chromosome: I | blastn | 1463 | 516 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Polynucleobacter | Polynucleobacter necessarius | ||
| 24791108 | 24791108 | PRJNA591000_P_NODE_8140_length_487_cov_6.237991_g6628_i0 | PRJNA591000 | 8140 | 487 | 6.237991 | 30.37901617 | Variovorax paradoxus | 34073 | Bacteria | Bacteria | 536 | 1.08e-147 | NTclustered | gi|2921523777|gb|CP157634.1| | 34073 | g6628 | i0 | 99.659 | 25.2032854209446 | 293 | 1 | 100 | 0 | 195 | 487 | 192865 | 193157 | Variovorax paradoxus strain 110B chromosome 1, complete sequence | blastn | 12274 | 536 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax paradoxus | ||
| 25364892 | 25364892 | PRJNA591000_P_NODE_3080_length_791_cov_2.925197_g2353_i0 | PRJNA591000 | 3080 | 791 | 2.925197 | 23.13830827 | Neisseria | 482 | Bacteria | Bacteria | 809 | 0 | NTclustered | gi|2072525100|gb|CP079818.1| | 33053 | g2353 | i0 | 98.268 | 63.7294563843236 | 462 | 8 | 98 | 0 | 218 | 679 | 667751 | 668212 | Neisseria perflava strain LPB0400 chromosome, complete genome | blastn | 50410 | 809 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | Neisseria perflava | ||
| 25364893 | 25364893 | PRJNA591000_P_NODE_3620_length_749_cov_18.076389_g2819_i0 | PRJNA591000 | 3620 | 749 | 18.076389 | 135.39215361 | Burkholderia | 32008 | Bacteria | Bacteria | 1201 | 0 | NTclustered | gi|1913871957|gb|CP032009.1| | 292 | g2819 | i0 | 95.612 | 222.296395193591 | 752 | 27 | 100 | 5 | 1 | 749 | 3151909 | 3152657 | Burkholderia cepacia strain 39628 chromosome 1, complete sequence | blastn | 166500 | 1210 | 0.992561983471074 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia cepacia |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;