contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA591000" and tax_phylum = "Chordata"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 564965 | 564965 | PRJNA591000_P_NODE_15681_length_227_cov_2.797980_g14075_i0 | PRJNA591000 | 15681 | 227 | 2.79798 | 6.3514146 | Mus musculus | 10090 | Chordata | Chordata | 324 | 3.88e-84 | NTclustered | gi|45544808|gb|AC110171.29| | 10090 | g14075 | i0 | 99.438 | 1 | 178 | 1 | 100 | 0 | 50 | 227 | 183536 | 183359 | Mus musculus chromosome 12, clone RP23-400A5, complete sequence | blastn | 227 | 324 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 4392439 | 4392439 | PRJNA591000_P_NODE_8084_length_489_cov_4.236957_g6575_i0 | PRJNA591000 | 8084 | 489 | 4.236957 | 20.71871973 | Mus musculus | 10090 | Chordata | Chordata | 538 | 3e-148 | NTclustered | gi|49615228|gb|AC118017.15| | 10090 | g6575 | i0 | 100 | 40.4969325153374 | 291 | 0 | 100 | 0 | 199 | 489 | 150381 | 150671 | Mus musculus chromosome 7, clone RP23-457C1, complete sequence | blastn | 19803 | 538 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5668663 | 5668663 | PRJNA591000_P_NODE_10125_length_443_cov_1.299517_g8559_i0 | PRJNA591000 | 10125 | 443 | 1.299517 | 5.75686031 | Mus musculus | 10090 | Chordata | Chordata | 307 | 8.28e-79 | NTclustered | gi|50345243|gb|AC132435.3| | 10090 | g8559 | i0 | 100 | 0.708803611738149 | 166 | 0 | 70 | 0 | 1 | 166 | 172277 | 172442 | Mus musculus BAC clone RP23-223L12 from 10, complete sequence | blastn | 314 | 307 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 6943094 | 6943094 | PRJNA591000_P_NODE_12926_length_407_cov_1.624339_g11338_i0 | PRJNA591000 | 12926 | 407 | 1.624339 | 6.61105973 | Phasianus colchicus | 9054 | Chordata | Chordata | 56.5 | 0.003 | NTclustered | gi|1776081384|ref|XM_031590476.1| | 9054 | g11338 | i0 | 100 | 0.0737100737100737 | 30 | 0 | 7 | 0 | 11 | 40 | 5638 | 5609 | PREDICTED: Phasianus colchicus mitogen-activated protein kinase kinase kinase 19 (MAP3K19), partial mRNA | blastn | 30 | 56.5 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Phasianus | Phasianus colchicus | |
| 8791429 | 8791429 | PRJNA591000_P_NODE_5747_length_604_cov_3.297391_g4528_i0 | PRJNA591000 | 5747 | 604 | 3.297391 | 19.91624164 | Mus | 10088 | Chordata | Chordata | 791 | 0 | NTclustered | gi|1304473138|ref|NM_001358854.1| | 10090 | g4528 | i0 | 100 | 78.8526490066225 | 428 | 0 | 100 | 0 | 177 | 604 | 2300 | 2727 | Mus musculus colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) (Csf2rb), transcript variant 1, mRNA | blastn | 47627 | 791 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 9493343 | 9493343 | PRJNA591000_P_NODE_4828_length_671_cov_2.182243_g3818_i0 | PRJNA591000 | 4828 | 671 | 2.182243 | 14.64285053 | Mus musculus | 10090 | Chordata | Chordata | 244 | 1.03e-59 | NTclustered | gi|49258279|gb|AC131695.4| | 10090 | g3818 | i0 | 100 | 1.23248882265276 | 132 | 0 | 63 | 0 | 540 | 671 | 97341 | 97472 | Mus musculus BAC clone RP23-396F8 from chromosome 6, complete sequence | blastn | 827 | 244 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 11341968 | 11341968 | PRJNA591000_P_NODE_649_length_1296_cov_4.017364_g441_i0 | PRJNA591000 | 649 | 1296 | 4.017364 | 52.06503744 | Mus | 10088 | Chordata | Chordata | 821 | 0 | NTclustered | gi|756142290|gb|KP260515.1| | 10090 | g441 | i0 | 99.557 | 71.2654320987654 | 451 | 1 | 73 | 1 | 618 | 1068 | 74 | 523 | Mus musculus strain ME mitochondrion, complete genome | blastn | 92360 | 821 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 17142575 | 17142575 | PRJNA591000_P_NODE_4914_length_665_cov_3.823899_g2877_i2 | PRJNA591000 | 4914 | 665 | 3.823899 | 25.42892835 | Dendropsophus ebraccatus | 150705 | Chordata | Chordata | 87.9 | 1.82e-12 | NTclustered | gi|2853363747|ref|XM_069951117.1| | 150705 | g2877 | i2 | 92.063 | 7.69022556390977 | 63 | 3 | 9 | 1 | 568 | 630 | 3114 | 3174 | PREDICTED: Dendropsophus ebraccatus serpin family A member 10 (SERPINA10), mRNA | blastn | 5114 | 87.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Hylidae | Dendropsophus | Dendropsophus ebraccatus | |
| 17142578 | 17142578 | PRJNA591000_P_NODE_6554_length_553_cov_1.994275_g5193_i0 | PRJNA591000 | 6554 | 553 | 1.994275 | 11.02834075 | Mus musculus | 10090 | Chordata | Chordata | 300 | 1.76e-76 | NTclustered | gi|1907120376|ref|XM_036160199.1| | 10090 | g5193 | i0 | 100 | 72.0506329113924 | 162 | 0 | 88 | 0 | 125 | 286 | 1540 | 1701 | PREDICTED: Mus musculus pyridoxal-dependent decarboxylase domain containing 1 (Pdxdc1), transcript variant X4, mRNA | blastn | 39844 | 300 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 18416779 | 18416779 | PRJNA591000_P_NODE_11135_length_428_cov_1.676692_g9557_i0 | PRJNA591000 | 11135 | 428 | 1.676692 | 7.17624176 | Mus musculus | 10090 | Chordata | Chordata | 272 | 2.91e-68 | NTclustered | gi|50345243|gb|AC132435.3| | 10090 | g9557 | i0 | 100 | 10.9322429906542 | 147 | 0 | 57 | 0 | 1 | 147 | 172619 | 172473 | Mus musculus BAC clone RP23-223L12 from 10, complete sequence | blastn | 4679 | 272 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 19691324 | 19691324 | PRJNA591000_P_NODE_2976_length_800_cov_3.901427_g2270_i0 | PRJNA591000 | 2976 | 800 | 3.901427 | 31.211416 | Mus musculus | 10090 | Chordata | Chordata | 1188 | 0 | NTclustered | gi|28412105|gb|AC124740.4| | 10090 | g2270 | i0 | 96.561 | 1.74125 | 727 | 8 | 91 | 3 | 64 | 790 | 32693 | 33402 | Mus musculus BAC clone RP23-356M1 from chromosome 18, complete sequence | blastn | 1393 | 1188 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 20967102 | 20967102 | PRJNA591000_P_NODE_13997_length_395_cov_0.699454_g12402_i0 | PRJNA591000 | 13997 | 395 | 0.699454 | 2.7628433 | Mus musculus | 10090 | Chordata | Chordata | 91.6 | 8.01e-14 | NTclustered | gi|13435980|gb|BC004824.1| | 10090 | g12402 | i0 | 100 | 11.6632911392405 | 49 | 0 | 12 | 0 | 341 | 389 | 27 | 75 | Mus musculus rhotekin, mRNA (cDNA clone IMAGE:2609590), **** WARNING: chimeric clone **** | blastn | 4607 | 91.6 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 22242055 | 22242055 | PRJNA591000_P_NODE_5298_length_638_cov_4.087028_g4177_i0 | PRJNA591000 | 5298 | 638 | 4.087028 | 26.07523864 | Mus musculus | 10090 | Chordata | Chordata | 761 | 0 | NTclustered | gi|49615228|gb|AC118017.15| | 10090 | g4177 | i0 | 96.818 | 45.0595611285266 | 440 | 14 | 100 | 0 | 199 | 638 | 150381 | 150820 | Mus musculus chromosome 7, clone RP23-457C1, complete sequence | blastn | 28748 | 761 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;