RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA591000" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA591000 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9493344 9493344 PRJNA591000_P_NODE_6768_length_540_cov_1.880626_g5384_i0 PRJNA591000 6768 540 1.880626 10.1553804 Cyprideis torosa 163714 Arthropoda Arthropoda 167 1.82e-36   NTclustered gi|1936454988|emb|OB765544.1| 163714 g5384 i0 96.97 0.309259259259259 99 3 18 0 29 127 388 290 Cyprideis torosa blastn 167 167 1 Eukaryota Opisthokonta Metazoa Arthropoda Ostracoda Podocopida Cytherideidae Cyprideis Cyprideis torosa
17142573 17142573 PRJNA591000_P_NODE_4754_length_676_cov_1.823802_g3761_i0 PRJNA591000 4754 676 1.823802 12.32890152 Cybaeus reticulatus 634012 Arthropoda Arthropoda 110 3.94e-19   NTclustered gi|226597113|gb|FJ263774.1| 634012 g3761 i0 91.25 7.38757396449704 80 7 24 0 1 80 97 176 Cybaeus reticulatus histone 3 gene, partial cds blastn 4994 110 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Cybaeidae Cybaeus Cybaeus reticulatus
18989982 18989982 PRJNA591000_P_NODE_7555_length_507_cov_20.981172_g6081_i0 PRJNA591000 7555 507 20.981172 106.37454204 root 1 Root_unresolved Root_unresolved 564 5.15e-156   NTclustered gi|294661761|dbj|AB526262.1| 6669 g6081 i0 99.357 119.039447731755 311 2 61 0 1 311 2245 1935 Daphnia pulex ncRNA, kairomone-inducible transcript blastn 60353 569 0.991212653778559 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia pulex

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;