RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA591000" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA591000 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10769213 10769213 PRJNA591000_P_NODE_15549_length_275_cov_5.426829_g13943_i0 PRJNA591000 15549 275 5.426829 14.92377975 uncultured Chroococcidiopsis sp. 259957 Bacteria Bacteria 412 1.0099999999999997e-110   NTclustered gi|225696260|gb|FJ805927.1| 259957 g13943 i0 94.118 102.392727272727 272 14 99 2 1 271 2852 3122 Uncultured Chroococcidiopsis sp. clone AS3_3 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 28158 412 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis uncultured Chroococcidiopsis sp.
19691329 19691329 PRJNA591000_P_NODE_696_length_1266_cov_4.590137_g473_i0 PRJNA591000 696 1266 4.590137 58.11113442 uncultured Chroococcidiopsis sp. 259957 Bacteria Bacteria 516 3.82e-141   NTclustered gi|225696260|gb|FJ805927.1| 259957 g473 i0 93.642 88.2424960505529 346 20 72 2 805 1148 1873 2218 Uncultured Chroococcidiopsis sp. clone AS3_3 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 111715 516 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis uncultured Chroococcidiopsis sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;