RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA588137" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA588137 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4392252 4392252 PRJNA588137_S_NODE_4644_length_280_cov_2.231884_g4611_i0 PRJNA588137 4644 280 2.231884 6.2492752 Kwoniella dendrophila 4975 Fungi Fungi 206 1.8699999999999998e-48   NTclustered gi|2752982483|ref|XM_066217289.1| 1295534 g4611 i0 82.5 12.0678571428571 240 37 85 5 1 237 315 78 Kwoniella dendrophila CBS 6074 60S ribosomal protein L44 (L201_001500), partial mRNA blastn 3379 206 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella dendrophila
5668518 5668518 PRJNA588137_S_NODE_8145_length_247_cov_0.885057_g8112_i0 PRJNA588137 8145 247 0.885057 2.18609079 Malassezia restricta 76775 Fungi Fungi 167 7.64e-37   NTclustered gi|1546634206|ref|XM_027628763.1| 76775 g8112 i0 100 0.364372469635628 90 0 36 0 153 242 1 90 Malassezia restricta S-adenosylmethionine-dependent methyltransferase (MRET_2136), partial mRNA blastn 90 167 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
6942973 6942973 PRJNA588137_S_NODE_9786_length_244_cov_0.900585_g9753_i0 PRJNA588137 9786 244 0.900585 2.1974274 Malassezia restricta 76775 Fungi Fungi 451 1.86e-122   NTclustered gi|1546632222|ref|XM_027627771.1| 76775 g9753 i0 100 1 244 0 100 0 1 244 812 569 Malassezia restricta ubiquitin-activating enzyme E1 C (MRET_1144), partial mRNA blastn 244 451 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
9493202 9493202 PRJNA588137_S_NODE_6588_length_251_cov_0.865169_g6555_i0 PRJNA588137 6588 251 0.865169 2.17157419 Malassezia restricta 76775 Fungi Fungi 442 1.1599999999999995e-119   NTclustered gi|1546630503|ref|XM_027626912.1| 76775 g6555 i0 98.406 1 251 4 100 0 1 251 731 481 Malassezia restricta metallo-beta-lactamase superfamily protein (MRET_0285), partial mRNA blastn 251 442 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
20966882 20966882 PRJNA588137_S_NODE_11097_length_241_cov_0.916667_g11064_i0 PRJNA588137 11097 241 0.916667 2.20916747 Malassezia restricta 76775 Fungi Fungi 444 3.06e-120   NTclustered gi|1546637369|ref|XM_027630327.1| 76775 g11064 i0 100 0.995850622406639 240 0 99 0 1 240 363 124 Malassezia restricta DUF775 domain protein (MRET_3700), partial mRNA blastn 240 444 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
23517161 23517161 PRJNA588137_S_NODE_8399_length_247_cov_0.885057_g8366_i0 PRJNA588137 8399 247 0.885057 2.18609079 Malassezia restricta 76775 Fungi Fungi 457 4.05e-124   NTclustered gi|1546630953|ref|XM_027627137.1| 76775 g8366 i0 100 1.65182186234818 247 0 100 0 1 247 214 460 Malassezia restricta ATP-dependent RNA helicase DDX19/DBP5 (MRET_0510), partial mRNA blastn 408 457 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;