RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA577580 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4391517 4391517 PRJNA577580_P_NODE_4304_length_433_cov_3.113889_g4226_i0 PRJNA577580 4304 433 3.113889 13.48313937 Stachylina grandispora 1213193 Fungi Fungi 274 8.2e-69   NTclustered gi|397529739|gb|JQ302924.1| 1213193 g4226 i0 81.127 69.0900692840647 355 56 81 11 1 349 1404 1055 Stachylina grandispora note PCR amp code:290-183 28S ribosomal RNA gene, partial sequence blastn 29916 274 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Harpellaceae Stachylina Stachylina grandispora
19690420 19690420 PRJNA577580_P_NODE_11496_length_272_cov_1.567839_g11418_i0 PRJNA577580 11496 272 1.567839 4.26452208 Microconidiobolus nodosus 1167817 Fungi Fungi 207 5.03e-49   NTclustered gi|2032035993|gb|MW795365.1| 1167817 g11418 i0 81.423 59.2205882352941 253 47 93 0 4 256 23486 23234 Microconidiobolus nodosus strain ATCC 16577 mitochondrion, complete genome blastn 16108 207 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Microconidiobolus Microconidiobolus nodosus
25364419 25364419 PRJNA577580_P_NODE_4460_length_425_cov_4.721591_g4382_i0 PRJNA577580 4460 425 4.721591 20.06676175 Fungi 4751 Fungi Fungi 119 3.98e-22   NTclustered gi|545689710|gb|KC297569.1| 426306 g4382 i0 88.776 18.1317647058824 98 10 23 1 3 100 1775 1871 Orphella catalaunica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7706 119 1 Eukaryota Opisthokonta Fungi Zoopagomycota   Orphellales Orphellaceae Orphella Orphella catalaunica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;