RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA577580 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17716000 17716000 PRJNA577580_P_NODE_5134_length_395_cov_18.319876_g5056_i0 PRJNA577580 5134 395 18.319876 72.3635102 Haplosclerida 6049 Porifera other_Eukaryota 108 7.95e-19   NTclustered gi|1284883228|gb|KY825184.1| 178514 g5056 i0 81.159 5.99493670886076 138 22 35 3 213 349 3474 3340 Amphimedon compressa voucher MNRJ:18771 internal transcribed spacer 2 and 28S ribosomal RNA gene, partial sequence blastn 2368 108 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon compressa
24790166 24790166 PRJNA577580_P_NODE_15940_length_243_cov_3.435294_g15862_i0 PRJNA577580 15940 243 3.435294 8.34776442 Porifera sp. FLK015 2797286 Porifera other_Eukaryota 73.1 1.68e-8   NTclustered gi|1946637738|gb|MW377661.1| 2797286 g15862 i0 90.909 25.7901234567901 55 3 22 2 190 243 63 10 Porifera sp. FLK015 large subunit ribosomal RNA gene, partial sequence blastn 6267 73.1 1 Eukaryota Opisthokonta Metazoa Porifera         Porifera sp. FLK015

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;