RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA577580 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3114970 3114970 PRJNA577580_P_NODE_4503_length_423_cov_1.851429_g4425_i0 PRJNA577580 4503 423 1.851429 7.83154467 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.041   NTclustered gi|690475301|emb|LN015976.1| 99802 g4425 i0 100 0.066193853427896 28 0 7 0 356 383 2003 1976 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0015753 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
5667723 5667723 PRJNA577580_P_NODE_14705_length_248_cov_1.702857_g14627_i0 PRJNA577580 14705 248 1.702857 4.22308536 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 172 1.6499999999999999e-38   NTclustered gi|1084291230|ref|XM_018794292.1| 6183 g14627 i0 81.951 18.3870967741935 205 35 82 2 37 240 800 597 Schistosoma mansoni putative mitochondrial phosphate carrier protein partial mRNA blastn 4560 172 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
18415975 18415975 PRJNA577580_P_NODE_6215_length_360_cov_4.320557_g6137_i0 PRJNA577580 6215 360 4.320557 15.5540052 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 588 2.0999999999999994e-163   NTclustered gi|926460157|gb|KR132223.1| 282301 g6137 i0 96.111 82.8166666666667 360 14 100 0 1 360 528 169 Macrostomum lignano clone c100550_g1_i1 mRNA sequence blastn 29814 588 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
18415988 18415988 PRJNA577580_P_NODE_8255_length_315_cov_2.024793_g8177_i0 PRJNA577580 8255 315 2.024793 6.37809795 Macrostomum sp. CEL-2014 1468207 Platyhelminthes Platyhelminthes 555 1.8399999999999994e-153   NTclustered gi|588313885|gb|KC869843.1| 1468207 g8177 i0 98.413 100.533333333333 315 5 100 0 1 315 2700 3014 Macrostomum sp. CEL-2014 28S ribosomal RNA gene, partial sequence blastn 31668 555 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum sp. CEL-2014
23516405 23516405 PRJNA577580_P_NODE_10979_length_277_cov_8.254902_g10901_i0 PRJNA577580 10979 277 8.254902 22.86607854 Macrostomum quiritium 683716 Platyhelminthes Platyhelminthes 507 4.53e-139   NTclustered gi|1268553033|gb|KY652215.1| 683716 g10901 i0 99.639 98.2129963898917 277 1 100 0 1 277 357 81 Macrostomum quiritium voucher DYDK1 18S ribosomal RNA gene, partial sequence blastn 27205 507 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum quiritium
24090005 24090005 PRJNA577580_P_NODE_13239_length_255_cov_1.604396_g13161_i0 PRJNA577580 13239 255 1.604396 4.0912098 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 60.2 1.38e-4   NTclustered gi|2224869|gb|U53001.1|DLU53001 27895 g13161 i0 100 12.7607843137255 32 0 13 0 159 190 80 111 Dendrocoelum lacteum ribosomal RNA large subunit gene, partial sequence blastn 3254 60.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dendrocoelidae Dendrocoelum Dendrocoelum lacteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;