RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA577580 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1839464 1839464 PRJNA577580_P_NODE_12062_length_266_cov_2.932642_g11984_i0 PRJNA577580 12062 266 2.932642 7.80082772 uncultured Microsporidia 546760 Fungi Fungi 387 5.87e-103   NTclustered gi|374706411|gb|JN619406.1| 546760 g11984 i0 92.884 86.3684210526316 267 17 100 2 1 266 449 714 Uncultured Microsporidia clone Chula_Myositis 1 small subunit ribosomal RNA gene, partial sequence blastn 22974 387 1 Eukaryota Opisthokonta Fungi Microsporidia         uncultured Microsporidia
3114893 3114893 PRJNA577580_P_NODE_11183_length_275_cov_1.584158_g11105_i0 PRJNA577580 11183 275 1.584158 4.3564345 uncultured Microsporidia 546760 Fungi Fungi 436 5.969999999999999e-118   NTclustered gi|374706411|gb|JN619406.1| 546760 g11105 i0 95.29 99.6254545454545 276 11 100 2 1 275 384 110 Uncultured Microsporidia clone Chula_Myositis 1 small subunit ribosomal RNA gene, partial sequence blastn 27397 436 1 Eukaryota Opisthokonta Fungi Microsporidia         uncultured Microsporidia
7515987 7515987 PRJNA577580_P_NODE_626_length_1066_cov_3.989930_g580_i0 PRJNA577580 626 1066 3.98993 42.5326538 Fungi 4751 Fungi Fungi 183 3.68e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g580 i0 95.652 12.3348968105066 115 4 11 1 902 1016 5537 5650 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13149 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
10768341 10768341 PRJNA577580_P_NODE_5289_length_389_cov_1.250000_g5211_i0 PRJNA577580 5289 389 1.25 4.8625 Anisofilariata chironomi 745834 Fungi Fungi 89.8 2.83e-13   NTclustered gi|291603819|gb|GU126383.1| 745834 g5211 i0 71.688 1.15424164524422 385 90 96 16 17 389 1134 757 Anisofilariata chironomi isolate CP-NWR-1 small subunit ribosomal RNA gene, partial sequence blastn 449 89.8 1 Eukaryota Opisthokonta Fungi Microsporidia       Anisofilariata Anisofilariata chironomi
22241179 22241179 PRJNA577580_P_NODE_6378_length_355_cov_6.634752_g6300_i0 PRJNA577580 6378 355 6.634752 23.5533696 Vittaforma corneae 42399 Fungi Fungi 403 8.05e-108   NTclustered gi|667639983|ref|XR_552275.1| 993615 g6300 i0 87.395 2.07605633802817 357 37 99 7 6 355 33 388 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 737 403 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;