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contig_metadata

28 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 28 ✖

tax_clade 1

bioproject 1

  • PRJNA577580 · 28 ✖

analysis 1

  • blastn · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
564099 564099 PRJNA577580_P_NODE_3021_length_517_cov_6.234234_g2943_i0 PRJNA577580 3021 517 6.234234 32.23098978 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 324 9.72e-84   NTclustered gi|560190589|gb|KF633467.1| 91374 g2943 i0 78.897 38.7292069632495 526 76 99 29 2 517 2439 2939 Diplonema papillatum strain ATCC 50162 28S ribosomal RNA gene, complete sequence blastn 20023 324 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
1138083 1138083 PRJNA577580_P_NODE_3621_length_473_cov_2.892500_g3543_i0 PRJNA577580 3621 473 2.8925 13.681525 Peranema 3287 Euglenozoa other_Eukaryota 808 0   NTclustered gi|1803019098|gb|MT007870.1| 56466 g3543 i0 98.681 44.7272727272727 455 6 96 0 19 473 1896 1442 Peranema trichophorum strain PtR small subunit ribosomal RNA gene, partial sequence blastn 21156 808 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
3114988 3114988 PRJNA577580_P_NODE_5823_length_371_cov_4.657718_g5745_i0 PRJNA577580 5823 371 4.657718 17.28013378 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 473 6.349999999999999e-129   NTclustered gi|226347408|gb|FJ807243.1| 56466 g5745 i0 90.027 5.30188679245283 371 30 100 4 1 371 1037 1400 Peranema trichophorum strain CCAP 1260/1 B elongation factor 1 alpha mRNA, partial cds blastn 1967 473 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
4391565 4391565 PRJNA577580_P_NODE_9004_length_303_cov_1.730435_g8926_i0 PRJNA577580 9004 303 1.730435 5.24321805 Rhynchopus sp. ATCC 50230 202688 Euglenozoa other_Eukaryota 438 1.8499999999999999e-118   NTclustered gi|84105382|gb|DQ295214.1| 202688 g8926 i0 92.739 98.6006600660066 303 22 100 0 1 303 704 1006 Rhynchopus sp. ATCC 50230 alpha tubulin 1 gene, partial cds blastn 29876 438 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Rhynchopus Rhynchopus sp. ATCC 50230
5667761 5667761 PRJNA577580_P_NODE_385_length_1275_cov_50.942596_g351_i0 PRJNA577580 385 1275 50.942596 649.518099 uncultured Peranema sp. 1980988 Euglenozoa other_Eukaryota 1509 0   NTclustered gi|1182637172|gb|KY963139.1| 1980988 g351 i0 99.046 27.8517647058824 839 8 98 0 1 839 1478 640 Uncultured Peranema sp. clone SP1 small subunit ribosomal RNA gene, partial sequence blastn 35511 1509 1 Eukaryota Discoba   Euglenozoa Euglenida       uncultured Peranema sp.
5667804 5667804 PRJNA577580_P_NODE_8305_length_314_cov_2.427386_g8227_i0 PRJNA577580 8305 314 2.427386 7.62199204 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 416 9.039999999999999e-112   NTclustered gi|427188201|dbj|AB757706.1| 56466 g8227 i0 90.705 0.993630573248408 312 29 99 0 3 314 510 199 Peranema trichophorum rpl3 mRNA for 60S ribosomal protein L3, partial cds, strain: K-01 blastn 312 416 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
8217235 8217235 PRJNA577580_P_NODE_4767_length_410_cov_2.474777_g4689_i0 PRJNA577580 4767 410 2.474777 10.1465857 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 582 1.13e-161   NTclustered gi|1059792057|gb|AH005452.2| 56466 g4689 i0 99.377 48.6121951219512 321 2 78 0 90 410 2245 1925 Peranema trichophorum small subunit ribosomal RNA genes, partial sequence blastn 19931 582 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
8790917 8790917 PRJNA577580_P_NODE_12427_length_263_cov_1.484211_g12349_i0 PRJNA577580 12427 263 1.484211 3.90347493 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 93.5 1.41e-14   NTclustered gi|756179775|gb|KM986084.1| 5693 g12349 i0 90.141 10.8479087452471 71 7 27 0 193 263 354 284 Trypanosoma cruzi isolate Y-EA11 calmodulin (CALM) mRNA, partial cds blastn 2853 93.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
8790919 8790919 PRJNA577580_P_NODE_13647_length_252_cov_4.692737_g13569_i0 PRJNA577580 13647 252 4.692737 11.82569724 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 411 3.269999999999999e-110   NTclustered gi|11037201|gb|AF208879.1|AF208879 140242 g13569 i0 96.032 157.857142857143 252 10 100 0 1 252 712 963 Cruzella marina large subunit ribosomal RNA gene, partial sequence blastn 39780 414 0.992753623188406 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Cruzella Cruzella marina
9492432 9492432 PRJNA577580_P_NODE_17068_length_228_cov_2.503226_g16990_i0 PRJNA577580 17068 228 2.503226 5.70735528 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 313 8.44e-81   NTclustered gi|1714016877|gb|MN244156.1| 67003 g16990 i0 91.63 152.947368421053 227 18 99 1 1 227 651 876 Trypanosoma theileri isolate TBC15 large subunit ribosomal RNA gene, partial sequence blastn 34872 313 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
10768331 10768331 PRJNA577580_P_NODE_4009_length_450_cov_1.843501_g3931_i0 PRJNA577580 4009 450 1.843501 8.2957545 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 337 1.0699999999999996e-87   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g3931 i0 81.416 84.7888888888889 452 49 97 28 6 443 5565 5135 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 38155 337 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
11341436 11341436 PRJNA577580_P_NODE_5209_length_392_cov_2.391850_g5131_i0 PRJNA577580 5209 392 2.39185 9.376052 Trypanosoma 5690 Euglenozoa other_Eukaryota 359 1.97e-94   NTclustered gi|1673170038|ref|XR_003828668.1| 5698 g5131 i0 93.416 79.7321428571429 243 15 62 1 1 242 3838 4080 Trypanosoma rangeli 28S ribosomal RNA (TraAM80_08524), rRNA blastn 31255 359 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
11341444 11341444 PRJNA577580_P_NODE_7209_length_335_cov_1.912214_g7131_i0 PRJNA577580 7209 335 1.912214 6.4059169 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 196 1.38e-45   NTclustered gi|2414483|emb|Y00055.1| 5656 g7131 i0 78.869 91.0626865671642 336 38 92 20 1 308 7476 7146 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 30506 196 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
12617158 12617158 PRJNA577580_P_NODE_17150_length_227_cov_2.006494_g17072_i0 PRJNA577580 17150 227 2.006494 4.55474138 root 1 Root_unresolved Root_unresolved 71.3 5.58e-8   NTclustered gi|429330004|ref|NC_017754.2| 73025 g17072 i0 95.556 56.0660792951542 45 0 19 2 173 216 50026 50069 Eutreptiella gymnastica plastid, complete genome blastn 12727 71.3 1 Eukaryota Discoba   Euglenozoa Euglenida Eutreptiales Eutreptiaceae Eutreptiella Eutreptiella gymnastica
14592844 14592844 PRJNA577580_P_NODE_11672_length_270_cov_1.928934_g11594_i0 PRJNA577580 11672 270 1.928934 5.2081218 Trypanosoma grosi 169531 Euglenozoa other_Eukaryota 268 2.2599999999999994e-67   NTclustered gi|46091659|dbj|AB175623.1| 169531 g11594 i0 85.606 115.12962962963 264 29 96 7 13 270 5358 5618 Trypanosoma grosi genes for IGS, 18S rRNA, 5.8S rRNA, 28S rRNA and ITS1-7, isolate: HANTO blastn 31085 268 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grosi
14592854 14592854 PRJNA577580_P_NODE_12_length_3427_cov_108.021467_g7_i0 PRJNA577580 12 3427 108.021467 3701.89567409 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 2189 0   NTclustered gi|27461806|gb|AY130826.1| 56466 g7 i0 97.152 6.67143274000584 1299 31 38 5 1481 2775 1297 1 Peranema trichophorum voucher Carolina Biol. Supp. Co. (CBS) CE 13-1838 large subunit ribosomal RNA gene, partial sequence blastn 22863 2189 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
14592950 14592950 PRJNA577580_P_NODE_8812_length_306_cov_1.802575_g8734_i0 PRJNA577580 8812 306 1.802575 5.5158795 Trypanosoma rangeli 5698 Euglenozoa other_Eukaryota 252 2.62e-62   NTclustered gi|1673170038|ref|XR_003828668.1| 5698 g8734 i0 93.491 18.6078431372549 169 11 55 0 112 280 5243 5411 Trypanosoma rangeli 28S ribosomal RNA (TraAM80_08524), rRNA blastn 5694 252 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
15866653 15866653 PRJNA577580_P_NODE_11413_length_273_cov_1.440000_g11335_i0 PRJNA577580 11413 273 1.44 3.9312 Trypanosoma brucei 5691 Euglenozoa other_Eukaryota 95.3 4.11e-15   NTclustered gi|1376159113|ref|XR_002989671.1| 185431 g11335 i0 76.879 0.633699633699634 173 36 63 4 66 237 574 405 Trypanosoma brucei brucei TREU927 ribosomal RNA (Tb09_rRNA_3), rRNA blastn 173 95.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
15866761 15866761 PRJNA577580_P_NODE_8873_length_305_cov_1.547414_g8795_i0 PRJNA577580 8873 305 1.547414 4.7196127 Rhynchopus sp. ATCC 50230 202688 Euglenozoa other_Eukaryota 261 4.340000000000001e-65   NTclustered gi|25986816|gb|AY122622.1| 202688 g8795 i0 82.566 8.89180327868852 304 45 98 8 1 300 1461 1162 Rhynchopus sp. ATCC50230 heat shock protein 90 (HSP-90) gene, partial cds blastn 2712 261 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Rhynchopus Rhynchopus sp. ATCC 50230
16440830 16440830 PRJNA577580_P_NODE_9013_length_303_cov_1.356522_g8935_i0 PRJNA577580 9013 303 1.356522 4.11026166 Euglena 3038 Euglenozoa other_Eukaryota 87.9 7.74e-13   NTclustered gi|11524|emb|X12890.1| 3039 g8935 i0 89.706 2.27062706270627 68 7 22 0 214 281 463 396 Euglena gracilis rrnC operon containing 16S, 23S and 5S rDNA, tRNA-Ile(GAT) and tRNA-Ala(TGC) genes blastn 688 87.9 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
18989503 18989503 PRJNA577580_P_NODE_7055_length_338_cov_3.456604_g6977_i0 PRJNA577580 7055 338 3.456604 11.68332152 Kinetoplastea 5653 Euglenozoa other_Eukaryota 496 1.23e-135   NTclustered gi|77994641|gb|DQ207579.1| 312471 g6977 i0 93.235 100.58875739645 340 18 100 5 1 338 417 81 Neobodo designis strain HFCC9 18S ribosomal RNA gene, partial sequence blastn 33999 496 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
19690483 19690483 PRJNA577580_P_NODE_3596_length_475_cov_2.213930_g3518_i0 PRJNA577580 3596 475 2.21393 10.5161675 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 665 0   NTclustered gi|226347408|gb|FJ807243.1| 56466 g3518 i0 92.291 85.7747368421053 467 36 98 0 1 467 1106 640 Peranema trichophorum strain CCAP 1260/1 B elongation factor 1 alpha mRNA, partial cds blastn 40743 665 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
20264621 20264621 PRJNA577580_P_NODE_11916_length_268_cov_1.276923_g11838_i0 PRJNA577580 11916 268 1.276923 3.42215364 Bodo 5712 Euglenozoa other_Eukaryota 496 9.429999999999999e-136   NTclustered gi|45739068|gb|AY490226.1| 75058 g11838 i0 100 100.033582089552 268 0 100 0 1 268 1141 874 Bodo saltans 18S ribosomal RNA gene, partial sequence blastn 26809 496 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
20966211 20966211 PRJNA577580_P_NODE_2337_length_591_cov_2.005792_g2259_i0 PRJNA577580 2337 591 2.005792 11.85423072 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 494 8.079999999999998e-135   NTclustered gi|110589646|gb|DQ683345.1| 56466 g2259 i0 82.878 48.5516074450085 549 94 93 0 37 585 642 1190 Peranema trichophorum Hsp90 gene, partial cds blastn 28694 494 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
22241095 22241095 PRJNA577580_P_NODE_1078_length_856_cov_2.108557_g1012_i0 PRJNA577580 1078 856 2.108557 18.04924792 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 582 2.47e-161   NTclustered gi|110589646|gb|DQ683345.1| 56466 g1012 i0 90.315 30.2114485981308 444 43 100 0 413 856 1257 814 Peranema trichophorum Hsp90 gene, partial cds blastn 25861 582 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
22815291 22815291 PRJNA577580_P_NODE_10498_length_283_cov_1.961905_g10420_i0 PRJNA577580 10498 283 1.961905 5.55219115 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 455 1.7e-123   NTclustered gi|59891971|gb|AY753631.1| 266821 g10420 i0 95.76 71.4452296819788 283 11 100 1 1 283 1385 1104 Bodonidae sp. river Thames 18S ribosomal RNA gene, partial sequence blastn 20219 455 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   Bodonidae sp. river Thames
23516466 23516466 PRJNA577580_P_NODE_3679_length_469_cov_7.446970_g3601_i0 PRJNA577580 3679 469 7.44697 34.9262893 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 651 0   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g3601 i0 91.614 144.157782515991 477 31 100 7 1 469 4770 4295 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 67610 651 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
25364417 25364417 PRJNA577580_P_NODE_4220_length_439_cov_1.732240_g4142_i0 PRJNA577580 4220 439 1.73224 7.6045336 Trypanosoma 5690 Euglenozoa other_Eukaryota 401 3.6599999999999996e-107   NTclustered gi|1673141461|ref|XR_003828664.1| 83891 g4142 i0 97.059 98.123006833713 238 7 74 0 1 238 5208 4971 Trypanosoma conorhini 28S ribosomal RNA (Tco025E_06705), rRNA blastn 43076 401 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;