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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA577580 · 21 ✖

analysis 1

  • blastn · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
564067 564067 PRJNA577580_P_NODE_14941_length_247_cov_1.747126_g14863_i0 PRJNA577580 14941 247 1.747126 4.31540122 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 422 1.48e-113   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g14863 i0 99.149 75.8502024291498 235 0 94 2 1 233 237 3 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 18735 422 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
1839510 1839510 PRJNA577580_P_NODE_2602_length_560_cov_1.952772_g2524_i0 PRJNA577580 2602 560 1.952772 10.9355232 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 924 0   NTclustered gi|330902856|gb|JF298254.1| 1017091 g2524 i0 96.429 58.1214285714286 560 20 100 0 1 560 1710 1151 Cochliopodium larifeili clone 902 18S ribosomal RNA gene, partial sequence blastn 32548 924 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
3689524 3689524 PRJNA577580_P_NODE_4843_length_407_cov_1.880240_g4765_i0 PRJNA577580 4843 407 1.88024 7.6525768 Paramoeba 200890 Discosea other_Eukaryota 148 4.839999999999999e-31   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g4765 i0 90.351 46.2137592137592 114 10 28 1 288 401 42044 42156 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 18809 148 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
6942201 6942201 PRJNA577580_P_NODE_1646_length_707_cov_907.258675_g1572_i0 PRJNA577580 1646 707 907.258675 6414.31883225 Cochliopodium minus 313997 Discosea other_Eukaryota 1007 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g1572 i0 94.923 52.5898161244696 650 21 91 9 1 646 645 4 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 37181 1007 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
7515983 7515983 PRJNA577580_P_NODE_17106_length_227_cov_25.876623_g17028_i0 PRJNA577580 17106 227 25.876623 58.73993421 Mayorella 242540 Discosea other_Eukaryota 324 3.88e-84   NTclustered gi|33946336|gb|AY294143.1| 242541 g17028 i0 96.907 87.9867841409692 194 5 85 1 34 227 429 621 Mayorella sp. JJP-2003 small subunit ribosomal RNA gene, partial sequence blastn 19973 324 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
7515985 7515985 PRJNA577580_P_NODE_5546_length_379_cov_4.905229_g5468_i0 PRJNA577580 5546 379 4.905229 18.59081791 Ripella 1217112 Discosea other_Eukaryota 516 1.07e-141   NTclustered gi|1269228349|gb|MF683474.1| 2047821 g5468 i0 97.682 81.6992084432718 302 3 79 4 80 379 700 999 Ripella platypodia clone 23.4.22 18S ribosomal RNA gene, partial sequence blastn 30964 518 0.996138996138996 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
8217278 8217278 PRJNA577580_P_NODE_9787_length_292_cov_2.182648_g9709_i0 PRJNA577580 9787 292 2.182648 6.37333216 Paramoeba invadens 1321612 Discosea other_Eukaryota 259 1.49e-64   NTclustered gi|1479784949|gb|MH934194.1| 1321612 g9709 i0 91.579 62.6472602739726 190 12 65 4 24 213 759 944 Paramoeba invadens strain SPS clone SPS_Shel-2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18293 259 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba invadens
12043086 12043086 PRJNA577580_P_NODE_13190_length_255_cov_3.692308_g13112_i0 PRJNA577580 13190 255 3.692308 9.4153854 Vannella persistens 303303 Discosea other_Eukaryota 350 7.34e-92   NTclustered gi|284192503|gb|GQ265466.1| 303303 g13112 i0 91.255 81.6588235294118 263 13 100 10 1 255 169 429 Vannella persistens strain CCAP 1589/13 clone A132.7 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 20823 350 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella persistens
12043101 12043101 PRJNA577580_P_NODE_15710_length_244_cov_1.824561_g15632_i0 PRJNA577580 15710 244 1.824561 4.45192884 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 335 1.9499999999999992e-87   NTclustered gi|33946346|gb|AY294152.1| 242541 g15632 i0 91.429 101.233606557377 245 19 100 2 1 244 682 439 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 24701 335 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
12043115 12043115 PRJNA577580_P_NODE_1990_length_644_cov_5.791594_g1913_i0 PRJNA577580 1990 644 5.791594 37.29786536 Ripella sp. 805 1217113 Discosea other_Eukaryota 955 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g1913 i0 95.515 93.888198757764 602 19 93 6 45 644 1 596 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 60464 955 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
12617170 12617170 PRJNA577580_P_NODE_6970_length_340_cov_3.273408_g6892_i0 PRJNA577580 6970 340 3.273408 11.1295872 root 1 Root_unresolved Root_unresolved 183 1.0899999999999998e-41   NTclustered gi|28194600|gb|AF479544.1| 65659 g6892 i0 78.694 60.0029411764706 291 50 84 11 35 321 1372 1090 Acanthamoeba comandoni strain ATCC 30135 16S small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product blastn 20401 183 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba comandoni
13318031 13318031 PRJNA577580_P_NODE_311_length_1360_cov_101.226884_g279_i0 PRJNA577580 311 1360 101.226884 1376.6856224 Cochliopodium minus 313997 Discosea other_Eukaryota 1879 0   NTclustered gi|330902862|gb|JF298257.1| 313997 g279 i0 91.714 53.0426470588235 1400 40 100 49 1 1360 2135 772 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 72138 1879 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
13318033 13318033 PRJNA577580_P_NODE_3451_length_484_cov_11.440389_g3373_i0 PRJNA577580 3451 484 11.440389 55.37148276 Vannella simplex 197532 Discosea other_Eukaryota 821 0   NTclustered gi|284192604|gb|GQ265402.1| 197532 g3373 i0 97.314 96.9648760330578 484 12 100 1 1 484 307 789 Vannella simplex strain Ladoga Cl 12/2 clone A144.5 18S ribosomal RNA gene, partial sequence blastn 46931 821 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
15866728 15866728 PRJNA577580_P_NODE_5413_length_384_cov_2.289389_g5335_i0 PRJNA577580 5413 384 2.289389 8.79125376 Pellita digitata 1485084 Discosea other_Eukaryota 289 2.57e-73   NTclustered gi|608606230|gb|KF705037.1| 1485084 g5335 i0 83.861 70.3541666666667 316 37 81 9 35 344 1881 2188 Pellita digitata clone 2 18S ribosomal RNA gene, partial sequence blastn 27016 289 1 Eukaryota Amoebozoa   Discosea Flabellinia   Pellitidae Pellita Pellita digitata
18415900 18415900 PRJNA577580_P_NODE_12995_length_257_cov_2.771739_g12917_i0 PRJNA577580 12995 257 2.771739 7.12336923 Paramoeba branchiphila 308475 Discosea other_Eukaryota 289 1.64e-73   NTclustered gi|145386792|gb|EF216917.1| 308475 g12917 i0 88.797 84.0077821011673 241 20 92 6 22 257 1177 1415 Paramoeba branchiphila strain SEDMH1 28S large subunit ribosomal RNA gene, partial sequence blastn 21590 289 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
18415977 18415977 PRJNA577580_P_NODE_6535_length_352_cov_1.580645_g6457_i0 PRJNA577580 6535 352 1.580645 5.5638704 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 270 8.44e-68   NTclustered gi|470524163|ref|XM_004356394.1| 1257118 g6457 i0 81.232 89.1306818181818 341 59 96 5 14 351 576 914 Acanthamoeba castellanii str. Neff VATPase subunit A, putative (ACA1_171100), partial mRNA blastn 31374 270 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19690442 19690442 PRJNA577580_P_NODE_14636_length_249_cov_0.886364_g14558_i0 PRJNA577580 14636 249 0.886364 2.20704636 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 220 5.84e-53   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g14558 i0 86.341 13.2128514056225 205 24 82 4 45 249 33761 33961 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 3290 220 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
19690449 19690449 PRJNA577580_P_NODE_16436_length_242_cov_0.923077_g16358_i0 PRJNA577580 16436 242 0.923077 2.23384634 Paramoeba branchiphila 308475 Discosea other_Eukaryota 311 3.26e-80   NTclustered gi|226347442|gb|FJ807261.1| 308475 g16358 i0 90.558 98.0413223140496 233 22 96 0 5 237 850 618 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 23726 311 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
19690531 19690531 PRJNA577580_P_NODE_8936_length_304_cov_1.770563_g8858_i0 PRJNA577580 8936 304 1.770563 5.38251152 uncultured Vannellidae 544561 Discosea other_Eukaryota 163 1.25e-35   NTclustered gi|724028230|gb|KP099889.1| 544561 g8858 i0 80.169 40.8782894736842 237 32 77 14 48 281 706 482 Uncultured Vannellidae clone b18 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12427 163 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   uncultured Vannellidae
20966223 20966223 PRJNA577580_P_NODE_297_length_1380_cov_62.367253_g265_i0 PRJNA577580 297 1380 62.367253 860.6680914 Vannella ebro 207334 Discosea other_Eukaryota 1048 0   NTclustered gi|33946344|gb|AY294151.1| 207334 g265 i0 83.496 78.1579710144928 1127 182 82 4 173 1297 1137 13 Vannella ebro actin mRNA, complete cds blastn 107858 1048 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro
25364411 25364411 PRJNA577580_P_NODE_11420_length_273_cov_1.370000_g11342_i0 PRJNA577580 11420 273 1.37 3.7401 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 121 6.77e-23   NTclustered gi|300078498|gb|GU001160.1| 5755 g11342 i0 98.529 37.8351648351648 68 1 25 0 203 270 6425 6492 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10329 121 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;