RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA577580 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
564096 564096 PRJNA577580_P_NODE_2621_length_558_cov_10.606186_g2543_i0 PRJNA577580 2621 558 10.606186 59.18251788 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 355 3.74e-93   NTclustered gi|2782866953|ref|XM_067060166.1| 252671 g2543 i0 81.321 46.5017921146953 439 80 78 2 84 521 549 112 PREDICTED: Clytia hemisphaerica calmodulin (LOC136803441), mRNA blastn 25948 355 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
10768350 10768350 PRJNA577580_P_NODE_6069_length_364_cov_4.556701_g5991_i0 PRJNA577580 6069 364 4.556701 16.58639164 Orbicella faveolata 48498 Cnidaria other_Eukaryota 111 5.62e-20   NTclustered gi|1176091666|ref|XM_020760630.1| 48498 g5991 i0 81.159 2.80494505494505 138 26 38 0 113 250 3276 3139 PREDICTED: Orbicella faveolata brain-specific homeobox protein homolog (LOC110054263), transcript variant X2, mRNA blastn 1021 111 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
11341428 11341428 PRJNA577580_P_NODE_1509_length_739_cov_33.456456_g1435_i0 PRJNA577580 1509 739 33.456456 247.24320984 Malacalcyonacea 3028843 Cnidaria other_Eukaryota 154 1.97e-32   NTclustered gi|8101942|gb|AF262347.1| 51768 g1435 i0 95.789 13.809201623816 95 4 13 0 360 454 769 675 Alcyonium digitatum 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10205 154 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Alcyoniidae Alcyonium Alcyonium digitatum
13892170 13892170 PRJNA577580_P_NODE_3671_length_470_cov_2.415617_g3593_i0 PRJNA577580 3671 470 2.415617 11.3533999 Myxozoa 35581 Cnidaria other_Eukaryota 130 2.05e-25   NTclustered gi|241911758|gb|FJ417064.1| 371547 g3593 i0 86.667 20.1914893617021 120 13 26 2 190 309 1958 2074 Myxidium incurvatum isolate M0308 28S large subunit ribosomal RNA gene, partial sequence blastn 9490 130 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium incurvatum
17141655 17141655 PRJNA577580_P_NODE_1674_length_701_cov_2.826433_g1600_i0 PRJNA577580 1674 701 2.826433 19.81329533 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.019   NTclustered gi|2917940731|emb|OZ237564.1| 6108 g1600 i0 100 0.124108416547789 29 0 4 0 7 35 9975533 9975505 Anemonia sulcata genome assembly, chromosome: 10 blastn 87 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
24790137 24790137 PRJNA577580_P_NODE_11600_length_271_cov_1.575758_g11522_i0 PRJNA577580 11600 271 1.575758 4.27030418 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 279 1.05e-70   NTclustered gi|2782899958|ref|XM_067068260.1| 252671 g11522 i0 85.24 233.516605166052 271 40 100 0 1 271 448 178 PREDICTED: Clytia hemisphaerica uncharacterized protein (LOC136811635), mRNA blastn 63283 279 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
24790138 24790138 PRJNA577580_P_NODE_11640_length_270_cov_3.319797_g11562_i0 PRJNA577580 11640 270 3.319797 8.9634519 Hydra vulgaris 6087 Cnidaria other_Eukaryota 176 1.41e-39   NTclustered gi|2744780105|ref|XM_002158181.4| 6087 g11562 i0 80.889 15.162962962963 225 41 83 2 21 244 590 813 PREDICTED: Hydra vulgaris large ribosomal subunit protein uL2 (LOC100207178), mRNA blastn 4094 176 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;