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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA577580 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3689529 3689529 PRJNA577580_P_NODE_8543_length_310_cov_2.455696_g8465_i0 PRJNA577580 8543 310 2.455696 7.6126576 Eukaryota 2759 Fungi Fungi 176 1.65e-39   NTclustered gi|387156428|emb|HE806161.1| 1229259 g8465 i0 86.335 48.9903225806452 161 22 52 0 112 272 1969 1809 Uncultured Chytridium partial 26S rRNA gene, clone EopYyyy3 blastn 15187 176 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae   uncultured Chytridium
5667696 5667696 PRJNA577580_P_NODE_10485_length_283_cov_2.538095_g10407_i0 PRJNA577580 10485 283 2.538095 7.18280885 Polychytrium aggregatum 110093 Fungi Fungi 226 1.4499999999999998e-54   NTclustered gi|2432129754|ref|XM_053108222.1| 110093 g10407 i0 84.348 33.1095406360424 230 36 81 0 16 245 1022 1251 Polychytrium aggregatum DEAD box ATP-dependent RNA helicase (BJ171DRAFT_453702), mRNA blastn 9370 226 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
7515986 7515986 PRJNA577580_P_NODE_586_length_1096_cov_23.459433_g543_i0 PRJNA577580 586 1096 23.459433 257.11538568 Neocallimastigaceae 29007 Fungi Fungi 300 3.61e-76   NTclustered gi|82398579|gb|DQ273829.1| 324620 g543 i0 77.209 48.2436131386861 645 64 84 24 1 640 1408 1974 Cyllamyces aberensis isolate AFTOL-ID 846 28S ribosomal RNA gene, partial sequence blastn 52875 302 0.993377483443709 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Cyllamyces Cyllamyces aberensis
12043147 12043147 PRJNA577580_P_NODE_5050_length_399_cov_1.447853_g4972_i0 PRJNA577580 5050 399 1.447853 5.77693347 Batrachochytrium dendrobatidis 109871 Fungi Fungi 80.5 1.75e-10   NTclustered gi|2897841418|gb|CP161937.1| 109871 g4972 i0 95.918 13.3659147869674 49 2 12 0 3 51 40379 40331 Batrachochytrium dendrobatidis strain JEL423 chromosome 15 blastn 5333 80.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
12617167 12617167 PRJNA577580_P_NODE_5630_length_377_cov_2.825658_g5552_i0 PRJNA577580 5630 377 2.825658 10.65273066 Opisthokonta 33154 Fungi Fungi 195 5.639999999999999e-45   NTclustered gi|82398309|gb|DQ273787.1| 64517 g5552 i0 94.488 37.132625994695 127 6 34 1 246 372 2154 2279 Rhizophlyctis rosea isolate AFTOL-ID 43 28S ribosomal RNA gene, partial sequence blastn 13999 196 0.994897959183674 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
15866684 15866684 PRJNA577580_P_NODE_16293_length_242_cov_1.668639_g16215_i0 PRJNA577580 16293 242 1.668639 4.03810638 Polychytrium aggregatum 110093 Fungi Fungi 222 1.57e-53   NTclustered gi|2432168590|ref|XM_053112370.1| 110093 g16215 i0 86.408 82.2396694214876 206 24 84 4 37 240 2246 2043 Polychytrium aggregatum P-loop containing nucleoside triphosphate hydrolase protein (BJ171DRAFT_519711), mRNA blastn 19902 222 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
18415958 18415958 PRJNA577580_P_NODE_4015_length_449_cov_5.851064_g3937_i0 PRJNA577580 4015 449 5.851064 26.27127736 Lacustromyces hiemalis 110070 Fungi Fungi 254 1.11e-62   NTclustered gi|1866582727|gb|MT730902.1| 110070 g3937 i0 85.141 41.6837416481069 249 36 55 1 28 276 4563 4810 Lacustromyces hiemalis isolate JEL0938 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18716 254 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Lacustromyces Lacustromyces hiemalis
18989504 18989504 PRJNA577580_P_NODE_935_length_908_cov_4.528144_g872_i0 PRJNA577580 935 908 4.528144 41.11554752 Eukaryota 2759 Fungi Fungi 368 8.02e-97   NTclustered gi|387156428|emb|HE806161.1| 1229259 g872 i0 78.352 39.4449339207048 619 98 68 23 74 686 1381 1969 Uncultured Chytridium partial 26S rRNA gene, clone EopYyyy3 blastn 35816 368 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae   uncultured Chytridium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;