RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA577580 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
564079 564079 PRJNA577580_P_NODE_1641_length_708_cov_6.151181_g1567_i0 PRJNA577580 1641 708 6.151181 43.55036148 Placocista sp. CC-Grouse Mountain 741089 SAR_Eukaryotes SAR_Eukaryotes 968 0   NTclustered gi|290760485|gb|GQ144688.1| 741089 g1567 i0 91.48 73.6271186440678 716 44 100 15 1 708 1646 2352 Placocista sp. CC-Grouse Mountain large subunit ribosomal RNA gene, partial sequence blastn 52128 968 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae Placocista Placocista sp. CC-Grouse Mountain
4391464 4391464 PRJNA577580_P_NODE_12324_length_264_cov_1.518325_g12246_i0 PRJNA577580 12324 264 1.518325 4.008378 uncultured Euglyphidae sp. 1764557 SAR_Eukaryotes SAR_Eukaryotes 477 3.359999999999999e-130   NTclustered gi|959360330|gb|KT272503.1| 1764557 g12246 i0 99.242 100.003787878788 264 2 100 0 1 264 541 804 Uncultured Euglyphidae sp. clone CM2_2_4 18S ribosomal RNA gene, partial sequence blastn 26401 477 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae   uncultured Euglyphidae sp.
4391530 4391530 PRJNA577580_P_NODE_5204_length_392_cov_3.727273_g5126_i0 PRJNA577580 5204 392 3.727273 14.61091016 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 719 0   NTclustered gi|88792583|gb|DQ386164.1| 372086 g5126 i0 99.745 100.65306122449 392 1 100 0 1 392 1555 1946 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 39456 719 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
5667735 5667735 PRJNA577580_P_NODE_16965_length_230_cov_3.477707_g16887_i0 PRJNA577580 16965 230 3.477707 7.9987261 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 392 1.07e-104   NTclustered gi|88792583|gb|DQ386164.1| 372086 g16887 i0 97.391 51.095652173913 230 6 100 0 1 230 1967 2196 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 11752 392 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
5667743 5667743 PRJNA577580_P_NODE_1885_length_662_cov_3.073005_g1810_i0 PRJNA577580 1885 662 3.073005 20.3432931 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 315 7.61e-81   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g1810 i0 83.427 34.9033232628399 356 42 94 12 1 355 3655 3994 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 23106 315 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
18415973 18415973 PRJNA577580_P_NODE_6075_length_364_cov_3.859107_g5997_i0 PRJNA577580 6075 364 3.859107 14.04714948 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 510 4.74e-140   NTclustered gi|756877536|ref|NC_026310.1| 372086 g5997 i0 91.848 1.15934065934066 368 26 100 4 1 364 17656 18023 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 422 510 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
20264628 20264628 PRJNA577580_P_NODE_14556_length_249_cov_0.886364_g14478_i0 PRJNA577580 14556 249 0.886364 2.20704636 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 187 5.919999999999998e-43   NTclustered gi|33089911|gb|AY283754.1| 238774 g14478 i0 81.858 64.9076305220884 226 37 90 4 1 224 271 494 Clathrulina elegans isolate Cla70_1 actin mRNA, partial cds blastn 16162 187 1 Eukaryota Sar   Cercozoa     Clathrulinidae Clathrulina Clathrulina elegans
24790202 24790202 PRJNA577580_P_NODE_5580_length_379_cov_1.424837_g5502_i0 PRJNA577580 5580 379 1.424837 5.40013223 Mesofila limnetica 1979842 SAR_Eukaryotes SAR_Eukaryotes 560 4.85e-155   NTclustered gi|88792585|gb|DQ386166.1| 1979842 g5502 i0 93.931 77.9709762532981 379 9 100 8 1 379 1857 1493 Dimorpha-like sp. ATCC 50522 28S ribosomal RNA gene, partial sequence blastn 29551 560 1 Eukaryota Sar   Cercozoa     Mesofilidae Mesofila Mesofila limnetica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;