RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA577580 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2413537 2413537 PRJNA577580_P_NODE_6582_length_351_cov_1.258993_g6504_i0 PRJNA577580 6582 351 1.258993 4.41906543 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 211 5.17e-50   NTclustered gi|2785772740|ref|XM_067210427.1| 117008 g6504 i0 83.19 5.9031339031339 232 37 66 2 102 332 262 492 Cryptosporidium andersoni 40s ribosomal protein S2 (cand_001790), partial mRNA blastn 2072 211 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium andersoni
3114909 3114909 PRJNA577580_P_NODE_13403_length_254_cov_1.127072_g13325_i0 PRJNA577580 13403 254 1.127072 2.86276288 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|1620175782|ref|XM_028683395.1| 880535 g13325 i0 100 0.220472440944882 28 0 11 0 227 254 1486 1459 Plasmodium sp. gorilla clade G2 DEAD/DEAH box ATP-dependent RNA helicase, putative (PADL01_1242000), partial mRNA blastn 56 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
8217233 8217233 PRJNA577580_P_NODE_4547_length_420_cov_2.492795_g4469_i0 PRJNA577580 4547 420 2.492795 10.469739 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 137 1.09e-27   NTclustered gi|1472918886|ref|XR_003297360.1| 88456 g4469 i0 81.143 9.67619047619048 175 29 41 4 97 270 759 930 PREDICTED: Cyclospora cayetanensis large subunit ribosomal RNA (LOC113146729), rRNA blastn 4064 137 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
12617175 12617175 PRJNA577580_P_NODE_7290_length_333_cov_1.930769_g7212_i0 PRJNA577580 7290 333 1.930769 6.42946077 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 89.8 2.39e-13   NTclustered gi|400365274|gb|JQ684659.1| 5833 g7212 i0 88.158 19.0570570570571 76 7 23 2 1 75 1568 1642 Plasmodium falciparum isolate LF3 28S ribosomal RNA gene, partial sequence blastn 6346 89.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
15866681 15866681 PRJNA577580_P_NODE_15833_length_244_cov_0.912281_g15755_i0 PRJNA577580 15833 244 0.912281 2.22596564 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 279 9.27e-71   NTclustered gi|1620150562|ref|XM_028678648.1| 85471 g15755 i0 87.398 88.3524590163934 246 27 100 4 1 244 353 596 Plasmodium relictum polyubiquitin, putative (PRELSG_1312500), partial mRNA blastn 21558 279 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
15866712 15866712 PRJNA577580_P_NODE_3953_length_453_cov_3.507895_g3875_i0 PRJNA577580 3953 453 3.507895 15.89076435 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 82.4 5.6e-11   NTclustered gi|1931714359|ref|XR_552297.2| 54757 g3875 i0 84.524 7.89845474613687 84 11 18 2 111 193 4020 4102 Plasmodium vinckei vinckei ribosomal RNA (PVVCY_0502190), rRNA blastn 3578 82.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
24790159 24790159 PRJNA577580_P_NODE_1520_length_737_cov_6.534639_g1446_i0 PRJNA577580 1520 737 6.534639 48.16028943 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.021   NTclustered gi|1620181669|ref|XM_028684540.1| 880535 g1446 i0 100 0.039348710990502 29 0 4 0 27 55 891 863 Plasmodium sp. gorilla clade G2 lipase, putative (PADL01_1426900), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;