RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA577580 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4391537 4391537 PRJNA577580_P_NODE_6324_length_357_cov_2.003521_g6246_i0 PRJNA577580 6324 357 2.003521 7.15256997 Cotonvirus japonicum 3059904 Viruses Viruses 67.6 1.21e-6   NTclustered gi|2500766720|ref|NC_079139.1| 2811091 g6246 i0 81.395 0.57703081232493 86 12 24 4 3 86 533397 533314 Cotonvirus japonicus DNA, complete genome blastn 206 67.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Cotonvirus Cotonvirus japonicum
6241738 6241738 PRJNA577580_P_NODE_7845_length_322_cov_1.831325_g7767_i0 PRJNA577580 7845 322 1.831325 5.8968665 Megavirus 3044761 Viruses Viruses 78.7 4.99e-10   NTclustered gi|363539767|ref|NC_016072.1| 1094892 g7767 i0 84.146 1.7360248447205 82 11 25 2 58 138 1129728 1129808 Megavirus chiliensis, complete genome blastn 559 78.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Megavirus Megavirus chilense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;