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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 11 ✖

bioproject 1

  • PRJNA577580 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1839459 1839459 PRJNA577580_P_NODE_11022_length_277_cov_1.754902_g10944_i0 PRJNA577580 11022 277 1.754902 4.86107854 Dicloster acuatus 91190 Plants Plants 309 1.3700000000000003e-79   NTclustered gi|2724824305|gb|PP746556.1| 91190 g10944 i0 87.591 64.2202166064982 274 24 99 5 3 276 2142 1879 Dicloster acuatus culture SAG:41.98 mitochondrion, complete genome blastn 17789 309 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dicloster Dicloster acuatus
5667779 5667779 PRJNA577580_P_NODE_6025_length_366_cov_1.539249_g5947_i0 PRJNA577580 6025 366 1.539249 5.63365134 Polytoma uvella 40532 Plants Plants 54.7 0.01   NTclustered gi|1108488083|gb|KX828177.1| 40532 g5947 i0 96.875 0.262295081967213 32 1 9 0 53 84 52182 52213 Polytoma uvella strain UTEX 964 plastid, partial genome blastn 96 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytoma Polytoma uvella
5667819 5667819 PRJNA577580_P_NODE_9585_length_295_cov_1.675676_g9507_i0 PRJNA577580 9585 295 1.675676 4.9432442 Dicloster acuatus 91190 Plants Plants 414 3.0299999999999998e-111   NTclustered gi|2724824305|gb|PP746556.1| 91190 g9507 i0 92.491 90.1762711864407 293 17 98 4 1 290 1389 1679 Dicloster acuatus culture SAG:41.98 mitochondrion, complete genome blastn 26602 414 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dicloster Dicloster acuatus
9492407 9492407 PRJNA577580_P_NODE_14128_length_250_cov_4.994350_g14050_i0 PRJNA577580 14128 250 4.99435 12.485875 Chlorella vulgaris 3077 Plants Plants 385 1.97e-102   NTclustered gi|77627727|dbj|AB237642.1| 3077 g14050 i0 94.444 101.816 252 10 100 4 1 250 2091 1842 Chlorella vulgaris NIES:227 gene for 28S ribosomal RNA, partial sequence blastn 25454 385 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
13892175 13892175 PRJNA577580_P_NODE_5971_length_367_cov_2.353741_g5893_i0 PRJNA577580 5971 367 2.353741 8.63822947 Eukaryota 2759 Plants Plants 673 0   NTclustered gi|1714003650|gb|MN243923.1| 3079 g5893 i0 99.728 99.8773841961853 367 1 100 0 1 367 864 498 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 36655 673 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
14592838 14592838 PRJNA577580_P_NODE_10792_length_280_cov_1.294686_g10714_i0 PRJNA577580 10792 280 1.294686 3.6251208 Tetraselmis marina 41888 Plants Plants 128 4.17e-25   NTclustered gi|2301280732|ref|NC_066039.1| 41888 g10714 i0 86.441 38.125 118 15 42 1 109 226 5509 5625 Tetraselmis marina mitochondrion, complete genome blastn 10675 128 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorodendrophyceae Chlorodendrales Chlorodendraceae Tetraselmis Tetraselmis marina
17141698 17141698 PRJNA577580_P_NODE_5334_length_387_cov_1.719745_g5256_i0 PRJNA577580 5334 387 1.719745 6.65541315 Monoraphidium neglectum 145388 Plants Plants 143 2.13e-29   NTclustered gi|926778745|ref|XM_014042393.1| 145388 g5256 i0 86.26 0.338501291989664 131 18 34 0 203 333 267 137 Monoraphidium neglectum 40S ribosomal protein S17-4 mRNA blastn 131 143 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
18989500 18989500 PRJNA577580_P_NODE_5635_length_377_cov_2.309211_g5557_i0 PRJNA577580 5635 377 2.309211 8.70572547 Chlorellales 35460 Plants Plants 172 2.64e-38   NTclustered gi|404276808|gb|JQ655149.1| 3077 g5557 i0 77.627 45.9045092838196 295 58 77 5 1 291 1845 2135 Chlorella vulgaris heat shock protein 90 mRNA, complete cds blastn 17306 172 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
19690439 19690439 PRJNA577580_P_NODE_13876_length_252_cov_0.871508_g13798_i0 PRJNA577580 13876 252 0.871508 2.19620016 Auxenochlorella protothecoides 3075 Plants Plants 182 2.79e-41   NTclustered gi|760445552|ref|XM_011401543.1| 3075 g13798 i0 80.242 5.45634920634921 248 43 97 5 1 245 1307 1551 Auxenochlorella protothecoides V-type proton ATPase catalytic subunit A isoform 1 partial mRNA blastn 1375 182 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
20966194 20966194 PRJNA577580_P_NODE_1577_length_722_cov_2.596302_g1503_i0 PRJNA577580 1577 722 2.596302 18.74530044 Helicosporidium sp. ex Simulium jonesi 145475 Plants Plants 444 1.0199999999999994e-119   NTclustered gi|54399515|gb|AY729488.1| 145475 g1503 i0 79.294 47.0941828254848 652 121 89 13 70 714 1431 787 Helicosporidium sp. ex Simulium jonesii EF-1 alpha-like protein (efl) mRNA, complete cds blastn 34002 444 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Helicosporidium Helicosporidium sp. ex Simulium jonesi
24090024 24090024 PRJNA577580_P_NODE_9019_length_303_cov_1.321739_g8941_i0 PRJNA577580 9019 303 1.321739 4.00486917 Ulvophyceae 33103 Plants Plants 320 7.01e-83   NTclustered gi|969822368|gb|KT950951.1| 325651 g8941 i0 89.641 84.3630363036304 251 26 83 0 53 303 1 251 Bryopsis corticulans actin gene, partial cds blastn 25562 320 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis corticulans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;