contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1839532 | 1839532 | PRJNA577580_P_NODE_4722_length_412_cov_2.463127_g4644_i0 | PRJNA577580 | 4722 | 412 | 2.463127 | 10.14808324 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 534 | 3.22e-147 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g4644 | i0 | 90.097 | 108.296116504854 | 414 | 37 | 99 | 4 | 1 | 410 | 657252 | 656839 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 44618 | 534 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 1839585 | 1839585 | PRJNA577580_P_NODE_9702_length_293_cov_3.290909_g9624_i0 | PRJNA577580 | 9702 | 293 | 3.290909 | 9.64236337 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 276 | 1.48e-69 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g9624 | i0 | 84.407 | 106.37542662116 | 295 | 31 | 98 | 14 | 1 | 287 | 1316336 | 1316623 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 31168 | 276 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 3114891 | 3114891 | PRJNA577580_P_NODE_10603_length_282_cov_1.545455_g10525_i0 | PRJNA577580 | 10603 | 282 | 1.545455 | 4.3581831 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 379 | 1.05e-100 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g10525 | i0 | 91.103 | 93.3794326241135 | 281 | 24 | 99 | 1 | 2 | 282 | 1315200 | 1314921 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 26333 | 379 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4391568 | 4391568 | PRJNA577580_P_NODE_9484_length_296_cov_3.143498_g9406_i0 | PRJNA577580 | 9484 | 296 | 3.143498 | 9.30475408 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 361 | 4.02e-95 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g9406 | i0 | 88.487 | 167.932432432432 | 304 | 27 | 100 | 2 | 1 | 296 | 3862987 | 3862684 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 49708 | 361 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 5667716 | 5667716 | PRJNA577580_P_NODE_13925_length_251_cov_1.752809_g13847_i0 | PRJNA577580 | 13925 | 251 | 1.752809 | 4.39955059 | Rohdeia mirabilis | 2528008 | Bacteria | Bacteria | 202 | 2.13e-47 | NTclustered | gi|1712658140|gb|CP036290.1| | 2528008 | g13847 | i0 | 81.323 | 271.462151394422 | 257 | 40 | 99 | 6 | 2 | 251 | 3894538 | 3894793 | Planctomycetes bacterium Pla163 chromosome, complete genome | blastn | 68137 | 202 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Rohdeia | Rohdeia mirabilis | |||
| 5667726 | 5667726 | PRJNA577580_P_NODE_15145_length_246_cov_3.560694_g15067_i0 | PRJNA577580 | 15145 | 246 | 3.560694 | 8.75930724 | Rohdeia mirabilis | 2528008 | Bacteria | Bacteria | 211 | 3.46e-50 | NTclustered | gi|1712658140|gb|CP036290.1| | 2528008 | g15067 | i0 | 85.572 | 5.74390243902439 | 201 | 29 | 82 | 0 | 1 | 201 | 3894812 | 3895012 | Planctomycetes bacterium Pla163 chromosome, complete genome | blastn | 1413 | 211 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Rohdeia | Rohdeia mirabilis | |||
| 6942204 | 6942204 | PRJNA577580_P_NODE_16806_length_234_cov_2.869565_g16728_i0 | PRJNA577580 | 16806 | 234 | 2.869565 | 6.7147821 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 137 | 5.62e-28 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g16728 | i0 | 78.059 | 35.7051282051282 | 237 | 38 | 98 | 11 | 5 | 234 | 3862460 | 3862689 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 8355 | 137 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 9492375 | 9492375 | PRJNA577580_P_NODE_1028_length_874_cov_4.686642_g963_i0 | PRJNA577580 | 1028 | 874 | 4.686642 | 40.96125108 | Methylacidiphilum caldifontis | 2795386 | Bacteria | Bacteria | 54.7 | 0.025 | NTclustered | gi|1999107441|gb|CP065957.1| | 2795386 | g963 | i0 | 100 | 0.0331807780320366 | 29 | 0 | 3 | 0 | 458 | 486 | 88122 | 88150 | Methylacidiphilum caldifontis strain IT6 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Methylacidiphilae | Methylacidiphilales | Methylacidiphilaceae | Methylacidiphilum (ex Ratnadevi et al. 2023) | Methylacidiphilum caldifontis | |
| 9492479 | 9492479 | PRJNA577580_P_NODE_6168_length_362_cov_1.328720_g6090_i0 | PRJNA577580 | 6168 | 362 | 1.32872 | 4.8099664 | Saltatorellus ferox | 2528018 | Bacteria | Bacteria | 226 | 1.91e-54 | NTclustered | gi|1712682957|gb|CP036434.1| | 2528018 | g6090 | i0 | 83.004 | 242.914364640884 | 253 | 39 | 69 | 4 | 2 | 252 | 2930756 | 2931006 | Planctomycetes bacterium Poly30 chromosome, complete genome | blastn | 87935 | 226 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Saltatorellus | Saltatorellus ferox | |||
| 12043168 | 12043168 | PRJNA577580_P_NODE_790_length_985_cov_3.639254_g734_i0 | PRJNA577580 | 790 | 985 | 3.639254 | 35.8466519 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 1447 | 0 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g734 | i0 | 93.219 | 243.881218274112 | 988 | 60 | 99 | 7 | 4 | 985 | 1316328 | 1315342 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 240223 | 1447 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 13317976 | 13317976 | PRJNA577580_P_NODE_11451_length_272_cov_3.125628_g11373_i0 | PRJNA577580 | 11451 | 272 | 3.125628 | 8.50170816 | Stieleria maiorica | 2795974 | Bacteria | Bacteria | 71.3 | 6.89e-8 | NTclustered | gi|1726207917|gb|CP036264.1| | 2795974 | g11373 | i0 | 97.561 | 5.30882352941176 | 41 | 1 | 15 | 0 | 105 | 145 | 8440264 | 8440304 | Stieleria maiorica strain Mal15 chromosome | blastn | 1444 | 71.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Stieleria | Stieleria maiorica | |
| 16440810 | 16440810 | PRJNA577580_P_NODE_14153_length_250_cov_2.316384_g14075_i0 | PRJNA577580 | 14153 | 250 | 2.316384 | 5.79096 | Bacteria | 2 | Bacteria | Bacteria | 351 | 1.99e-92 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g14075 | i0 | 93.033 | 187.908 | 244 | 12 | 97 | 3 | 9 | 250 | 654422 | 654662 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 46977 | 351 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 17141708 | 17141708 | PRJNA577580_P_NODE_6354_length_356_cov_2.530035_g6276_i0 | PRJNA577580 | 6354 | 356 | 2.530035 | 9.0069246 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 56.5 | 0.003 | NTclustered | gi|2107958177|gb|CP070790.1| | 2026780 | g6276 | i0 | 100 | 0.0842696629213483 | 30 | 0 | 8 | 0 | 321 | 350 | 338829 | 338858 | MAG: Planctomycetota bacterium isolate bin1449 chromosome | blastn | 30 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 20966160 | 20966160 | PRJNA577580_P_NODE_10257_length_286_cov_3.267606_g10179_i0 | PRJNA577580 | 10257 | 286 | 3.267606 | 9.34535316 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 339 | 1.8099999999999997e-88 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g10179 | i0 | 89.011 | 161.405594405594 | 273 | 30 | 100 | 0 | 13 | 285 | 2060075 | 2059803 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 46162 | 339 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 21540078 | 21540078 | PRJNA577580_P_NODE_8337_length_314_cov_1.153527_g8259_i0 | PRJNA577580 | 8337 | 314 | 1.153527 | 3.62207478 | Engelhardtia | 139931 | Bacteria | Bacteria | 416 | 9.039999999999999e-112 | NTclustered | gi|1712638177|gb|CP036287.1| | 2528011 | g8259 | i0 | 90.764 | 216.445859872611 | 314 | 25 | 99 | 4 | 3 | 314 | 5248522 | 5248211 | Planctomycetes bacterium Pla133 chromosome, complete genome | blastn | 67964 | 416 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Engelhardtia | Engelhardtia mirabilis | |||
| 22241103 | 22241103 | PRJNA577580_P_NODE_1218_length_812_cov_4.719892_g1151_i0 | PRJNA577580 | 1218 | 812 | 4.719892 | 38.32552304 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 981 | 0 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g1151 | i0 | 88.93 | 192.454433497537 | 804 | 78 | 98 | 11 | 1 | 796 | 654603 | 655403 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 156273 | 981 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 23516465 | 23516465 | PRJNA577580_P_NODE_3639_length_472_cov_2.862155_g3561_i0 | PRJNA577580 | 3639 | 472 | 2.862155 | 13.5093716 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 359 | 2.42e-94 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g3561 | i0 | 87.5 | 148.845338983051 | 312 | 38 | 66 | 1 | 7 | 317 | 1315231 | 1314920 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 70255 | 359 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 24790192 | 24790192 | PRJNA577580_P_NODE_3860_length_458_cov_1.750649_g3782_i0 | PRJNA577580 | 3860 | 458 | 1.750649 | 8.01797242 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 569 | 9.919999999999996e-158 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g3782 | i0 | 89.254 | 67.410480349345 | 456 | 48 | 99 | 1 | 1 | 455 | 1316065 | 1316520 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 30874 | 569 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;