RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA577580" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA577580 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9492382 9492382 PRJNA577580_P_NODE_11128_length_276_cov_1.152709_g11050_i0 PRJNA577580 11128 276 1.152709 3.18147684 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 62.1 4.22e-5   NTclustered gi|2794954191|ref|XM_067864300.1| 2049356 g11050 i0 93.023 11.4094202898551 43 2 15 1 48 89 1917 1959 Monocercomonoides exilis putative CRE-CLP-2 protein (MONOS_11737), mRNA blastn 3149 62.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
9492394 9492394 PRJNA577580_P_NODE_12228_length_265_cov_1.307292_g12150_i0 PRJNA577580 12228 265 1.307292 3.4643238 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 62.1 4.02e-5   NTclustered gi|2806452230|ref|XM_068501058.1| 1144522 g12150 i0 89.583 0.520754716981132 48 5 18 0 217 264 544 591 Tritrichomonas foetus uncharacterized protein (TRFO_19864), partial mRNA blastn 138 62.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
12043148 12043148 PRJNA577580_P_NODE_5130_length_396_cov_1.287926_g5052_i0 PRJNA577580 5130 396 1.287926 5.10018696 uncultured Oxymonadida sp. 413579 Preaxostyla other_Eukaryota 313 1.57e-80   NTclustered gi|119117128|gb|DQ925205.1| 413579 g5052 i0 81.203 96.0833333333333 399 66 100 8 1 396 444 836 Unidentified Oxymonadida clone R9 alpha-tubulin (Atub) mRNA, partial cds blastn 38049 313 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida     uncultured Oxymonadida sp.
23516414 23516414 PRJNA577580_P_NODE_12239_length_265_cov_1.036458_g12161_i0 PRJNA577580 12239 265 1.036458 2.7466137 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 60.2 1.45e-4   NTclustered gi|2794948749|ref|XM_067868623.1| 2049356 g12161 i0 100 7.76603773584906 32 0 24 0 201 232 6927 6896 Monocercomonoides exilis uncharacterized protein (MONOS_15731), partial mRNA blastn 2058 60.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;