RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA577226" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA577226 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5665994 5665994 PRJNA577226_S_NODE_5525_length_593_cov_13.206835_g4614_i0 PRJNA577226 5525 593 13.206835 78.31653155 Asplanchna sp. 3231738 Rotifera other_Eukaryota 398 6.539999999999997e-106   NTclustered gi|2778092479|gb|PP988071.1| 3231738 g4614 i0 80.175 32.4907251264755 570 82 95 25 11 571 1860 2407 Asplanchna sp. chromosome I mitochondrion, complete sequence blastn 19267 398 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sp.
10766967 10766967 PRJNA577226_S_NODE_70309_length_151_cov_2.263158_g69370_i0 PRJNA577226 70309 151 2.263158 3.41736858 Keratella cochlearis 204738 Rotifera other_Eukaryota 124 2.5699999999999997e-24   NTclustered gi|1020308490|gb|KT986313.1| 204738 g69370 i0 81.699 4.6158940397351 153 24 100 4 1 151 421 571 Keratella cochlearis clone 19.5Montig cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial blastn 697 124 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Keratella Keratella cochlearis
13316403 13316403 PRJNA577226_S_NODE_57271_length_165_cov_2.859375_g56332_i0 PRJNA577226 57271 165 2.859375 4.71796875 Asplanchna brightwellii 2005548 Rotifera other_Eukaryota 161 2.2e-35   NTclustered gi|2906176134|gb|PV021768.1| 2005548 g56332 i0 84.431 85.2545454545455 167 22 100 4 1 165 1267 1103 Asplanchna brightwellii chromosome II mitochondrion, complete sequence blastn 14067 161 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna brightwellii
19689084 19689084 PRJNA577226_S_NODE_68936_length_153_cov_1.008621_g67997_i0 PRJNA577226 68936 153 1.008621 1.54319013 Brachionus angularis 396692 Rotifera other_Eukaryota 198 1.5199999999999999e-46   NTclustered gi|1999716438|gb|MT875426.1| 396692 g67997 i0 91.096 95.281045751634 146 13 95 0 3 148 749 604 Brachionus angularis chromosome II mitochondrion, complete sequence blastn 14578 198 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus angularis
23514373 23514373 PRJNA577226_S_NODE_43099_length_189_cov_2.848684_g42160_i0 PRJNA577226 43099 189 2.848684 5.38401276 Brachionus rotundiformis 96890 Rotifera other_Eukaryota 150 5.59e-32   NTclustered gi|1066800230|gb|KX364937.1| 96890 g42160 i0 81.421 67.6931216931217 183 34 97 0 1 183 1250 1432 Brachionus rotundiformis chromosome II mitochondrion, complete sequence blastn 12794 150 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rotundiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;