RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA577226" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA577226 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17139737 17139737 PRJNA577226_S_NODE_47434_length_181_cov_1.500000_g46495_i0 PRJNA577226 47434 181 1.5 2.715 Diaporthe negative-stranded RNA virus 1 3035782 Viruses Viruses 56.5 0.001   NTclustered gi|2554174728|gb|OQ808567.1| 3035782 g46495 i0 100 0.337016574585635 30 0 17 0 152 181 9299 9328 Diaporthe negative-stranded RNA virus 1 isolate SO4 9A, complete genome blastn 61 56.5 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Mymonaviridae   Diaporthe negative-stranded RNA virus 1
22238695 22238695 PRJNA577226_S_NODE_2938_length_929_cov_140.792601_g2139_i0 PRJNA577226 2938 929 140.792601 1307.96326329 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 137 2.5200000000000003e-27   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g2139 i0 100 8.95694294940797 74 0 8 0 780 853 74 1 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 8321 137 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
22238817 22238817 PRJNA577226_S_NODE_3338_length_843_cov_151.336228_g2139_i1 PRJNA577226 3338 843 151.336228 1275.76440204 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 137 2.28e-27   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g2139 i1 100 9.87069988137604 74 0 9 0 694 767 74 1 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 8321 137 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;