RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA577226" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA577226 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5665521 5665521 PRJNA577226_S_NODE_36745_length_205_cov_1.958333_g35806_i0 PRJNA577226 36745 205 1.958333 4.01458265 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 346 7.33e-91   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g35806 i0 97.073 119.468292682927 205 6 100 0 1 205 667673 667469 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 24491 346 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
8789919 8789919 PRJNA577226_S_NODE_12587_length_366_cov_1.747720_g11648_i0 PRJNA577226 12587 366 1.74772 6.3966552 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 660 0   NTclustered gi|1842053267|gb|CP039998.1| 713059 g11648 i0 99.18 74.5846994535519 366 3 100 0 1 366 147114 146749 Candidatus Saccharibacteria bacterium oral taxon 488 strain CM002 chromosome, complete genome blastn 27298 660 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;