RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA577226" and tax_phylum = "Candidatus Eiseniibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Eiseniibacteriota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA577226 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3112209 3112209 PRJNA577226_S_NODE_20983_length_276_cov_3.004184_g20044_i0 PRJNA577226 20983 276 3.004184 8.29154784 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 324 4.87e-84   NTclustered gi|2874254095|emb|OY970178.1| 2212470 g20044 i0 88.764 109.974637681159 267 27 96 3 2 266 1425432 1425697 MAG: Candidatus Eisenbacteria bacterium isolate MFD05942.bin.c.1 genome assembly, chromosome: 1 blastn 30353 324 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
4389753 4389753 PRJNA577226_S_NODE_53764_length_170_cov_2.894737_g52825_i0 PRJNA577226 53764 170 2.894737 4.9210529 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 254 3.63e-63   NTclustered gi|2874254017|emb|OY970342.1| 2212470 g52825 i0 93.529 60.9294117647059 170 11 100 0 1 170 4158280 4158449 MAG: Candidatus Eisenbacteria bacterium isolate MFD02242.bin.c.1 genome assembly, chromosome: 1 blastn 10358 254 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
6940701 6940701 PRJNA577226_S_NODE_64046_length_157_cov_2.525000_g63107_i0 PRJNA577226 64046 157 2.525 3.96425 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 193 7.32e-45   NTclustered gi|2874254017|emb|OY970342.1| 2212470 g63107 i0 89.032 4.29936305732484 155 17 99 0 1 155 4159305 4159459 MAG: Candidatus Eisenbacteria bacterium isolate MFD02242.bin.c.1 genome assembly, chromosome: 1 blastn 675 193 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
14590370 14590370 PRJNA577226_S_NODE_26892_length_241_cov_2.602941_g25953_i0 PRJNA577226 26892 241 2.602941 6.27308781 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 396 8.7e-106   NTclustered gi|2874254017|emb|OY970342.1| 2212470 g25953 i0 96.266 189.091286307054 241 9 100 0 1 241 4159072 4158832 MAG: Candidatus Eisenbacteria bacterium isolate MFD02242.bin.c.1 genome assembly, chromosome: 1 blastn 45571 396 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
17139430 17139430 PRJNA577226_S_NODE_36014_length_207_cov_2.858824_g35075_i0 PRJNA577226 36014 207 2.858824 5.91776568 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 337 4.469999999999999e-88   NTclustered gi|2874254017|emb|OY970342.1| 2212470 g35075 i0 96.117 229.251207729469 206 8 99 0 2 207 4155724 4155929 MAG: Candidatus Eisenbacteria bacterium isolate MFD02242.bin.c.1 genome assembly, chromosome: 1 blastn 47455 337 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;