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contig_metadata

32 rows where analysis = "blastn", bioproject = "PRJNA577226" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 32 ✖

bioproject 1

  • PRJNA577226 · 32 ✖

analysis 1

  • blastn · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1836654 1836654 PRJNA577226_S_NODE_15882_length_322_cov_5.357895_g14943_i0 PRJNA577226 15882 322 5.357895 17.2524219 Betacoronavirus pandemicum 3418604 Viruses Viruses 75 6.45e-9   NTclustered gi|2557654415|emb|OY684664.1| 2697049 g14943 i0 100 13.2360248447205 40 0 12 0 3 42 21966 21927 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 4262 75 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
3112116 3112116 PRJNA577226_S_NODE_17443_length_306_cov_99.706320_g16504_i0 PRJNA577226 17443 306 99.70632 305.1013392 Betacoronavirus pandemicum 3418604 Viruses Viruses 124 5.96e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g16504 i0 96.104 26.8529411764706 77 1 25 1 1 75 159 235 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8217 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
4388696 4388696 PRJNA577226_S_NODE_14624_length_337_cov_98.960000_g13685_i0 PRJNA577226 14624 337 98.96 333.4952 Betacoronavirus pandemicum 3418604 Viruses Viruses 117 1.11e-21   NTclustered gi|2165835426|emb|OV196492.1| 2697049 g13685 i0 94.737 13.4124629080119 76 2 22 2 263 336 138 63 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4520 117 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
5665083 5665083 PRJNA577226_S_NODE_22225_length_267_cov_114.578261_g21286_i0 PRJNA577226 22225 267 114.578261 305.92395687 Betacoronavirus pandemicum 3418604 Viruses Viruses 128 3.95e-25   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g21286 i0 96.203 30.8651685393258 79 1 29 1 1 77 159 237 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8241 128 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
5665255 5665255 PRJNA577226_S_NODE_27965_length_236_cov_8.814070_g27026_i0 PRJNA577226 27965 236 8.81407 20.8012052 Chrocaburb virus 3129338 Viruses Viruses 342 1.12e-89   NTclustered gi|2717317323|gb|PP171786.1| 3129338 g27026 i0 92.797 26.0169491525424 236 17 100 0 1 236 314 79 MAG: Chrocaburb virus isolate CC1A_k141_16204 genomic sequence blastn 6140 342 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Chrocaburb virus
5665624 5665624 PRJNA577226_S_NODE_40605_length_195_cov_1.734177_g39666_i0 PRJNA577226 40605 195 1.734177 3.38164515 Betacoronavirus pandemicum 3418604 Viruses Viruses 67.6 6.02e-7   NTclustered gi|2165835560|emb|OV196626.1| 2697049 g39666 i0 100 21.0974358974359 36 0 18 0 1 36 30051 30016 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4114 67.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
5665680 5665680 PRJNA577226_S_NODE_42885_length_190_cov_1.490196_g41946_i0 PRJNA577226 42885 190 1.490196 2.8313724 Betacoronavirus pandemicum 3418604 Viruses Viruses 62.1 2.71e-5   NTclustered gi|2165834600|emb|OV196107.1| 2697049 g41946 i0 97.297 18.3684210526316 37 0 19 1 155 190 127 91 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3490 62.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
6240861 6240861 PRJNA577226_S_NODE_31345_length_223_cov_1.774194_g30406_i0 PRJNA577226 31345 223 1.774194 3.95645262 Viruses 10239 Viruses Viruses 60.2 1.18e-4   NTclustered gi|2557654279|emb|OY684629.1| 2697049 g30406 i0 100 8.26008968609865 32 0 14 0 1 32 26146 26115 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 1842 60.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
6939394 6939394 PRJNA577226_S_NODE_17226_length_308_cov_99.166052_g16287_i0 PRJNA577226 17226 308 99.166052 305.43144016 Betacoronavirus pandemicum 3418604 Viruses Viruses 124 6.009999999999999e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g16287 i0 96.104 26.5714285714286 77 1 24 1 1 75 159 235 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8184 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
6940061 6940061 PRJNA577226_S_NODE_40366_length_196_cov_1.283019_g39427_i0 PRJNA577226 40366 196 1.283019 2.51471724 Ripaglys virus 3130696 Viruses Viruses 139 1.27e-28   NTclustered gi|2717320496|gb|PP172998.1| 3130696 g39427 i0 85.926 44.1122448979592 135 14 68 5 59 191 2145 2276 MAG: Ripaglys virus isolate KCAP2_k141_358354 genomic sequence blastn 8646 139 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripaglys virus
6940933 6940933 PRJNA577226_S_NODE_8466_length_460_cov_64.695035_g7532_i0 PRJNA577226 8466 460 64.695035 297.597161 Betacoronavirus pandemicum 3418604 Viruses Viruses 124 9.329999999999999e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g7532 i0 95.062 18.0130434782609 81 1 17 2 382 460 238 159 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8286 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8214188 8214188 PRJNA577226_S_NODE_10787_length_398_cov_74.313019_g9850_i0 PRJNA577226 10787 398 74.313019 295.76581562 Betacoronavirus pandemicum 3418604 Viruses Viruses 124 7.96e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g9850 i0 96.104 20.3793969849246 77 1 19 1 324 398 235 159 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8111 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8214706 8214706 PRJNA577226_S_NODE_28667_length_233_cov_132.275510_g27728_i0 PRJNA577226 28667 233 132.27551 308.2019383 Betacoronavirus pandemicum 3418604 Viruses Viruses 126 1.2099999999999999e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g27728 i0 96.154 35.2274678111588 78 1 33 1 158 233 236 159 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8208 126 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
10765540 10765540 PRJNA577226_S_NODE_17569_length_305_cov_2.570896_g16630_i0 PRJNA577226 17569 305 2.570896 7.8412328 Sopawol virus 3131668 Viruses Viruses 287 7.16e-73   NTclustered gi|2717323098|gb|PP173969.1| 3131668 g16630 i0 84.026 189.931147540984 313 34 99 14 2 305 362 57 MAG: Sopawol virus isolate SP1B_k141_158324 genomic sequence blastn 57929 287 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Sopawol virus
11340826 11340826 PRJNA577226_S_NODE_5429_length_598_cov_547.836007_g1510_i1 PRJNA577226 5429 598 547.836007 3276.05932186 Viruses 10239 Viruses Viruses 63.9 2.73e-5   NTclustered gi|2557653524|emb|OY683806.1| 2697049 g1510 i1 93.023 6.54682274247492 43 3 7 0 556 598 10386 10428 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3915 63.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12040981 12040981 PRJNA577226_S_NODE_39430_length_198_cov_1.745342_g38491_i0 PRJNA577226 39430 198 1.745342 3.45577716 Betacoronavirus pandemicum 3418604 Viruses Viruses 65.8 2.2e-6   NTclustered gi|2565365187|emb|OY637518.1| 2697049 g38491 i0 100 19.7878787878788 35 0 18 0 1 35 11667 11633 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3918 65.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13315592 13315592 PRJNA577226_S_NODE_27951_length_236_cov_133.432161_g27012_i0 PRJNA577226 27951 236 133.432161 314.89989996 Betacoronavirus pandemicum 3418604 Viruses Viruses 124 4.42e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g27012 i0 96.104 34.4745762711864 77 1 32 1 1 75 159 235 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8136 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
15864352 15864352 PRJNA577226_S_NODE_31493_length_222_cov_5.102703_g30554_i0 PRJNA577226 31493 222 5.102703 11.32800066 Betacoronavirus pandemicum 3418604 Viruses Viruses 73.1 1.51e-8   NTclustered gi|2165834320|emb|OV196026.1| 2697049 g30554 i0 100 19.0225225225225 39 0 18 0 1 39 29975 29937 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 4223 73.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
15864747 15864747 PRJNA577226_S_NODE_46593_length_183_cov_0.924658_g45654_i0 PRJNA577226 46593 183 0.924658 1.69212414 Allexivirus deltallii 3433711 Viruses Viruses 65.8 2e-6   NTclustered gi|2059392176|gb|MT279193.1| 12430 g45654 i0 100 0.191256830601093 35 0 19 0 83 117 1 35 Garlic virus D isolate GarVD_BR, complete genome blastn 35 65.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Allexivirus Allexivirus deltallii
17139737 17139737 PRJNA577226_S_NODE_47434_length_181_cov_1.500000_g46495_i0 PRJNA577226 47434 181 1.5 2.715 Diaporthe negative-stranded RNA virus 1 3035782 Viruses Viruses 56.5 0.001   NTclustered gi|2554174728|gb|OQ808567.1| 3035782 g46495 i0 100 0.337016574585635 30 0 17 0 152 181 9299 9328 Diaporthe negative-stranded RNA virus 1 isolate SO4 9A, complete genome blastn 61 56.5 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Mymonaviridae   Diaporthe negative-stranded RNA virus 1
17715015 17715015 PRJNA577226_S_NODE_14154_length_343_cov_185.820261_g13215_i0 PRJNA577226 14154 343 185.820261 637.36349523 Betacoronavirus 694002 Viruses Viruses 122 2.4399999999999999e-23   NTclustered gi|2165836382|emb|OV196890.1| 2697049 g13215 i0 96.053 24.0612244897959 76 1 22 1 3 76 42 117 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8253 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
18414708 18414708 PRJNA577226_S_NODE_8935_length_445_cov_66.727941_g8000_i0 PRJNA577226 8935 445 66.727941 296.93933745 Betacoronavirus pandemicum 3418604 Viruses Viruses 124 9e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g8000 i0 96.104 18.3460674157303 77 1 17 1 1 75 159 235 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8164 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
20263739 20263739 PRJNA577226_S_NODE_28436_length_234_cov_284.213198_g27497_i0 PRJNA577226 28436 234 284.213198 665.05888332 Betacoronavirus 694002 Viruses Viruses 122 1.5699999999999994e-23   NTclustered gi|2165836382|emb|OV196890.1| 2697049 g27497 i0 96.053 35.2692307692308 76 1 32 1 3 76 42 117 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8253 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
20264261 20264261 PRJNA577226_S_NODE_7236_length_502_cov_122.040860_g6306_i0 PRJNA577226 7236 502 122.04086 612.6451172 Betacoronavirus 694002 Viruses Viruses 122 3.6899999999999996e-23   NTclustered gi|2165836382|emb|OV196890.1| 2697049 g6306 i0 96.053 16.3605577689243 76 1 15 1 3 76 42 117 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8213 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
20963245 20963245 PRJNA577226_S_NODE_10117_length_413_cov_71.678191_g9181_i0 PRJNA577226 10117 413 71.678191 296.03092883 Betacoronavirus pandemicum 3418604 Viruses Viruses 124 8.289999999999999e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g9181 i0 96.104 19.772397094431 77 1 18 1 1 75 159 235 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8166 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
21539347 21539347 PRJNA577226_S_NODE_41417_length_193_cov_1.743590_g40478_i0 PRJNA577226 41417 193 1.74359 3.3651287 Viruses 10239 Viruses Viruses 58.4 3.58e-4   NTclustered gi|2453161536|dbj|LC758583.1| 129141 g40478 i0 94.595 16.9170984455959 37 2 19 0 1 37 7553 7517 Citrus leaf blotch virus CNU_JC RNA, complete genome blastn 3265 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Citrivirus Citrivirus citri
22238543 22238543 PRJNA577226_S_NODE_24198_length_255_cov_121.660550_g23259_i0 PRJNA577226 24198 255 121.66055 310.2344025 Betacoronavirus pandemicum 3418604 Viruses Viruses 124 4.839999999999999e-24   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g23259 i0 96.104 31.8196078431373 77 1 29 1 1 75 159 235 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8114 124 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
22238695 22238695 PRJNA577226_S_NODE_2938_length_929_cov_140.792601_g2139_i0 PRJNA577226 2938 929 140.792601 1307.96326329 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 137 2.5200000000000003e-27   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g2139 i0 100 8.95694294940797 74 0 8 0 780 853 74 1 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 8321 137 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
22238733 22238733 PRJNA577226_S_NODE_30638_length_225_cov_137.851064_g29699_i0 PRJNA577226 30638 225 137.851064 310.164894 Betacoronavirus pandemicum 3418604 Viruses Viruses 130 8.990000000000001e-26   NTclustered gi|2165832904|emb|OV195202.1| 2697049 g29699 i0 96.25 36.8088888888889 80 1 35 1 1 78 159 238 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8282 130 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
22238817 22238817 PRJNA577226_S_NODE_3338_length_843_cov_151.336228_g2139_i1 PRJNA577226 3338 843 151.336228 1275.76440204 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 137 2.28e-27   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g2139 i1 100 9.87069988137604 74 0 9 0 694 767 74 1 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 8321 137 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
23513803 23513803 PRJNA577226_S_NODE_22719_length_264_cov_2.982379_g21780_i0 PRJNA577226 22719 264 2.982379 7.87348056 Betacoronavirus pandemicum 3418604 Viruses Viruses 69.4 2.39e-7   NTclustered gi|2557646044|emb|OY675404.1| 2697049 g21780 i0 100 14.6969696969697 37 0 14 0 228 264 18436 18472 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3880 69.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
25363622 25363622 PRJNA577226_S_NODE_29620_length_229_cov_293.588542_g28681_i0 PRJNA577226 29620 229 293.588542 672.31776118 root 1 Root_unresolved Root_unresolved 122 1.54e-23   NTclustered gi|2165836382|emb|OV196890.1| 2697049 g28681 i0 96.053 36.5545851528384 76 1 32 1 3 76 42 117 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8371 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;