RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA577226" and tax_clade = "Candidatus Thermofonsia Clade 3"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 3 ✖

bioproject 1

  • PRJNA577226 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
561682 561682 PRJNA577226_S_NODE_28981_length_232_cov_2.143590_g28042_i0 PRJNA577226 28981 232 2.14359 4.9731288 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 235 1.92e-57   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g28042 i0 85.59 40.2629310344828 229 27 98 6 6 232 3495911 3496135 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 9341 235 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
10765530 10765530 PRJNA577226_S_NODE_17289_length_308_cov_1.955720_g16350_i0 PRJNA577226 17289 308 1.95572 6.0236176 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 287 7.240000000000001e-73   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g16350 i0 84.385 14.8863636363636 301 37 96 9 4 299 3495623 3495918 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 4585 287 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
22239183 22239183 PRJNA577226_S_NODE_46178_length_183_cov_2.157534_g45239_i0 PRJNA577226 46178 183 2.157534 3.94828722 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 154 4.15e-33   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g45239 i0 96.739 190.51912568306 92 3 50 0 30 121 3494679 3494588 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 34865 154 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;