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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA576995" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA576995 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
560816 560816 PRJNA576995_P_NODE_29741_length_279_cov_2.242718_g29149_i0 PRJNA576995 29741 279 2.242718 6.25718322 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 176 1.46e-39   NTclustered gi|290991132|ref|XM_002678144.1| 5762 g29149 i0 78.388 2.40143369175627 273 57 97 2 6 277 17 288 Naegleria gruberi ribosomal protein L3 (NAEGRDRAFT_79448), mRNA blastn 670 176 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
561061 561061 PRJNA576995_P_NODE_6341_length_638_cov_2.447788_g5760_i0 PRJNA576995 6341 638 2.447788 15.61688744 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 573 1.0899999999999996e-158   NTclustered gi|290996126|ref|XM_002680588.1| 5762 g5760 i0 84.37 90.7351097178683 595 81 92 10 50 638 28 616 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_55154), mRNA blastn 57889 573 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
561157 561157 PRJNA576995_P_NODE_9921_length_492_cov_1.787589_g9330_i0 PRJNA576995 9921 492 1.787589 8.79493788 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 865 0   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g9330 i0 98.374 25.9126016260163 492 8 100 0 1 492 3628 4119 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12749 865 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
3688374 3688374 PRJNA576995_P_NODE_38543_length_247_cov_0.885057_g37951_i0 PRJNA576995 38543 247 0.885057 2.18609079 Naegleria 5761 Heterolobosea other_Eukaryota 65.8 2.87e-6   NTclustered gi|38606345|gb|AY376153.1| 5762 g37951 i0 97.368 6.61943319838057 38 1 15 0 20 57 1011 1048 Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 1635 65.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6938755 6938755 PRJNA576995_P_NODE_23706_length_313_cov_1.283333_g23114_i0 PRJNA576995 23706 313 1.283333 4.01683229 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 573 5.049999999999998e-159   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g23114 i0 99.681 55.9105431309904 313 1 100 0 1 313 2910 2598 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17500 573 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
8213789 8213789 PRJNA576995_P_NODE_25967_length_300_cov_1.017621_g25375_i0 PRJNA576995 25967 300 1.017621 3.052863 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 549 8.119999999999997e-152   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g25375 i0 99.667 3.13 300 1 100 0 1 300 3238 3537 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 939 549 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
12039948 12039948 PRJNA576995_P_NODE_39430_length_246_cov_0.890173_g38838_i0 PRJNA576995 39430 246 0.890173 2.18982558 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 320 5.52e-83   NTclustered gi|290974165|ref|XM_002669771.1| 5762 g38838 i0 90.204 0.995934959349594 245 24 99 0 2 246 56 300 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_59838), mRNA blastn 245 320 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13314816 13314816 PRJNA576995_P_NODE_34251_length_253_cov_1.333333_g33659_i0 PRJNA576995 34251 253 1.333333 3.37333249 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 355 1.56e-93   NTclustered gi|290991471|ref|XM_002678313.1| 5762 g33659 i0 93.004 4.80632411067194 243 17 96 0 9 251 341 583 Naegleria gruberi 60S ribosomal protein L38 (NAEGRDRAFT_66493), partial mRNA blastn 1216 355 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13314900 13314900 PRJNA576995_P_NODE_42491_length_242_cov_0.911243_g41899_i0 PRJNA576995 42491 242 0.911243 2.20520806 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 448 2.3799999999999995e-121   NTclustered gi|2874368078|gb|PQ819802.1| 74082 g41899 i0 100 57.6446280991736 242 0 100 0 1 242 1606 1365 Vahlkampfia avara strain CCAP 1588/1A small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 13950 448 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
15863586 15863586 PRJNA576995_P_NODE_43473_length_241_cov_0.916667_g42881_i0 PRJNA576995 43473 241 0.916667 2.20916747 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 324 4.16e-84   NTclustered gi|290988076|ref|XM_002676702.1| 5762 g42881 i0 90.871 2 241 22 100 0 1 241 264 24 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_68050), partial mRNA blastn 482 324 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17138596 17138596 PRJNA576995_P_NODE_7574_length_575_cov_1.669323_g6988_i0 PRJNA576995 7574 575 1.669323 9.59860725 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 979 0   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g6988 i0 97.391 16.8365217391304 575 15 100 0 1 575 2031 2605 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9681 979 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
24786934 24786934 PRJNA576995_P_NODE_31680_length_269_cov_1.494898_g31088_i0 PRJNA576995 31680 269 1.494898 4.02127562 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 436 5.819999999999999e-118   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g31088 i0 95.911 29.1672862453532 269 11 100 0 1 269 4368 4100 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 7846 436 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;