RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA576995" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA576995 · 20 ✖

analysis 1

  • blastn · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1836264 1836264 PRJNA576995_P_NODE_38062_length_248_cov_0.880000_g37470_i0 PRJNA576995 38062 248 0.88 2.1824 Moesziomyces antarcticus 84753 Fungi Fungi 52.8 0.022   NTclustered gi|955494573|ref|XM_014802143.1| 84753 g37470 i0 100 0.112903225806452 28 0 11 0 110 137 490 517 Moesziomyces antarcticus uncharacterized protein (PAN0_004d2198), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Moesziomyces Moesziomyces antarcticus
1836301 1836301 PRJNA576995_P_NODE_42302_length_242_cov_0.911243_g41710_i0 PRJNA576995 42302 242 0.911243 2.20520806 Sporisorium graminicola 280036 Fungi Fungi 52.8 0.022   NTclustered gi|1701853099|ref|XM_029884840.1| 280036 g41710 i0 100 0.115702479338843 28 0 12 0 67 94 2184 2157 Sporisorium graminicola uncharacterized protein (EX895_004244), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Sporisorium Sporisorium graminicola
1836415 1836415 PRJNA576995_P_NODE_7282_length_588_cov_6.712621_g6697_i0 PRJNA576995 7282 588 6.712621 39.47021148 Pseudozyma flocculosa 84751 Fungi Fungi 272 4.0999999999999986e-68   NTclustered gi|630959635|ref|XM_007878035.1| 1277687 g6697 i0 79.545 52.5510204081633 396 69 66 8 164 553 390 1 Pseudozyma flocculosa PF-1 uncharacterized protein (PFL1_00541), partial mRNA blastn 30900 272 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Pseudozyma Pseudozyma flocculosa
3111341 3111341 PRJNA576995_P_NODE_14283_length_397_cov_1.901235_g13691_i0 PRJNA576995 14283 397 1.901235 7.54790295 Flammulina velutipes 38945 Fungi Fungi 734 0   NTclustered gi|1487130313|gb|MH468771.1| 38945 g13691 i0 100 103.501259445844 397 0 100 0 1 397 4370 3974 Flammulina velutipes strain strain NJ6-3 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, intergenic spacer 1, 5S ribosomal RNA gene, and intergenic spacer 2, complete sequence blastn 41090 734 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Flammulina Flammulina velutipes
4388493 4388493 PRJNA576995_P_NODE_7824_length_565_cov_6.528455_g7237_i0 PRJNA576995 7824 565 6.528455 36.88577075 Rhodotorula toruloides 5286 Fungi Fungi 366 1.7499999999999993e-96   NTclustered gi|1022852727|ref|XM_016415854.1| 1130832 g7237 i0 82.578 20.7699115044248 419 69 74 2 59 475 34 450 Rhodotorula toruloides NP11 40S ribosomal protein s15 (RHTO_02176), partial mRNA blastn 11735 366 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula toruloides
5664670 5664670 PRJNA576995_P_NODE_7585_length_574_cov_5.566866_g6999_i0 PRJNA576995 7585 574 5.566866 31.95381084 Rhodotorula graminis 29898 Fungi Fungi 394 8.17e-105   NTclustered gi|1069924879|ref|XM_018414273.1| 578459 g6999 i0 83.971 15.1411149825784 418 59 72 7 91 504 450 37 Rhodotorula graminis WP1 uncharacterized protein (RHOBADRAFT_43715), partial mRNA blastn 8691 394 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula graminis
10764982 10764982 PRJNA576995_P_NODE_29449_length_281_cov_1.350962_g28857_i0 PRJNA576995 29449 281 1.350962 3.79620322 Malassezia restricta 76775 Fungi Fungi 337 6.389999999999998e-88   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g28857 i0 98.429 81.3202846975089 191 3 68 0 1 191 3018 3208 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 22851 337 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
10765109 10765109 PRJNA576995_P_NODE_38629_length_247_cov_0.885057_g38037_i0 PRJNA576995 38629 247 0.885057 2.18609079 Malassezia restricta 76775 Fungi Fungi 455 1.4600000000000002e-123   NTclustered gi|1546637503|ref|XM_027630394.1| 76775 g38037 i0 100 0.995951417004049 246 0 99 0 2 247 267 22 Malassezia restricta uncharacterized protein (MRET_3767), partial mRNA blastn 246 455 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
10765125 10765125 PRJNA576995_P_NODE_39809_length_245_cov_1.587209_g39217_i0 PRJNA576995 39809 245 1.587209 3.88866205 Rhodotorula toruloides 5286 Fungi Fungi 161 3.52e-35   NTclustered gi|1022850907|ref|XM_016415376.1| 1130832 g39217 i0 79.741 34.1510204081633 232 39 93 8 1 228 663 890 Rhodotorula toruloides NP11 adenosylhomocysteinase (RHTO_01695), partial mRNA blastn 8367 161 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula toruloides
13314743 13314743 PRJNA576995_P_NODE_28771_length_284_cov_7.706161_g28179_i0 PRJNA576995 28771 284 7.706161 21.88549724 Vanrija albida 181172 Fungi Fungi 58.4 5.64e-4   NTclustered gi|2837728898|ref|XM_069353653.1| 181172 g28179 i0 100 0.109154929577465 31 0 11 0 234 264 31 1 Vanrija albida uncharacterized protein (Q8F55_005160), partial mRNA blastn 31 58.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija albida
13314853 13314853 PRJNA576995_P_NODE_37891_length_248_cov_0.880000_g37299_i0 PRJNA576995 37891 248 0.88 2.1824 Wallemia mellicola 1708541 Fungi Fungi 145 3.6e-30   NTclustered gi|588261452|ref|XM_006959808.1| 671144 g37299 i0 80.311 10.25 193 36 77 2 57 248 359 168 Wallemia mellicola CBS 633.66 ribosomal protein S11 mRNA blastn 2542 145 1 Eukaryota Opisthokonta Fungi Basidiomycota Wallemiomycetes Wallemiales Wallemiaceae Wallemia Wallemia mellicola
14589690 14589690 PRJNA576995_P_NODE_39372_length_246_cov_0.890173_g38780_i0 PRJNA576995 39372 246 0.890173 2.18982558 Malassezia sympodialis 76777 Fungi Fungi 52.8 0.022   NTclustered gi|1092926507|ref|XM_018885996.1| 1230383 g38780 i0 100 0.113821138211382 28 0 11 0 88 115 462 489 Malassezia sympodialis ATCC 42132 uncharacterized protein (MSY001_0900), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia sympodialis
15863462 15863462 PRJNA576995_P_NODE_32793_length_262_cov_1.629630_g32201_i0 PRJNA576995 32793 262 1.62963 4.2696306 Flammulina velutipes 38945 Fungi Fungi 484 1.99e-132   NTclustered gi|1487130313|gb|MH468771.1| 38945 g32201 i0 100 100.62213740458 262 0 100 0 1 262 4634 4373 Flammulina velutipes strain strain NJ6-3 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, intergenic spacer 1, 5S ribosomal RNA gene, and intergenic spacer 2, complete sequence blastn 26363 484 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Flammulina Flammulina velutipes
15863539 15863539 PRJNA576995_P_NODE_39133_length_246_cov_0.890173_g38541_i0 PRJNA576995 39133 246 0.890173 2.18982558 Pseudozyma flocculosa 84751 Fungi Fungi 54.7 0.006   NTclustered gi|630960285|ref|XM_007878360.1| 1277687 g38541 i0 100 0.117886178861789 29 0 12 0 157 185 713 685 Pseudozyma flocculosa PF-1 uncharacterized protein (PFL1_00859), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Pseudozyma Pseudozyma flocculosa
19687165 19687165 PRJNA576995_P_NODE_26096_length_299_cov_1.358407_g25504_i0 PRJNA576995 26096 299 1.358407 4.06163693 Tilletiopsis washingtonensis 58919 Fungi Fungi 172 2.05e-38   NTclustered gi|1423574600|ref|XM_025743711.1| 58919 g25504 i0 89.63 17.5317725752508 135 14 45 0 81 215 201 67 Tilletiopsis washingtonensis putative RPL42B-ribosomal protein L36a.e (FA09DRAFT_333974), partial mRNA blastn 5242 172 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis
19687218 19687218 PRJNA576995_P_NODE_29876_length_279_cov_1.116505_g29284_i0 PRJNA576995 29876 279 1.116505 3.11504895 Rhodotorula toruloides 5286 Fungi Fungi 316 8.25e-82   NTclustered gi|1022869776|ref|XM_016420189.1| 1130832 g29284 i0 89.837 80.426523297491 246 25 88 0 2 247 255 10 Rhodotorula toruloides NP11 Ras-related protein Rab-1A (RHTO_06528), partial mRNA blastn 22439 316 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula toruloides
19687249 19687249 PRJNA576995_P_NODE_32196_length_266_cov_1.471503_g31604_i0 PRJNA576995 32196 266 1.471503 3.91419798 Malassezia restricta 76775 Fungi Fungi 396 9.759999999999997e-106   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g31604 i0 93.609 97.1992481203008 266 16 100 1 1 266 1838 1574 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 25855 396 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
20962966 20962966 PRJNA576995_P_NODE_34717_length_251_cov_0.865169_g34125_i0 PRJNA576995 34717 251 0.865169 2.17157419 Filobasidium floriforme 5210 Fungi Fungi 436 5.369999999999999e-118   NTclustered gi|2185538594|ref|XM_046181025.1| 5210 g34125 i0 98.008 1 251 5 100 0 1 251 2226 2476 Filobasidium floriforme putative extracellular elastinolytic metallo proteinase precursor (HD553DRAFT_319457), mRNA blastn 251 436 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Filobasidium Filobasidium floriforme
24787016 24787016 PRJNA576995_P_NODE_39600_length_246_cov_0.890173_g39008_i0 PRJNA576995 39600 246 0.890173 2.18982558 Dioszegia hungarica 4972 Fungi Fungi 52.8 0.022   NTclustered gi|2432164276|ref|XM_053089482.1| 4972 g39008 i0 100 0.113821138211382 28 0 11 0 26 53 273 300 Dioszegia hungarica uncharacterized protein (MKK02DRAFT_36715), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Bulleribasidiaceae Dioszegia Dioszegia hungarica
25363384 25363384 PRJNA576995_P_NODE_7660_length_572_cov_1.264529_g7074_i0 PRJNA576995 7660 572 1.264529 7.23310588 Agaricomycetes 155619 Fungi Fungi 662 0   NTclustered gi|1461059303|gb|MH109044.1| 205764 g7074 i0 96.962 69.027972027972 395 10 69 2 1 394 584 191 Aleurodiscus dextrinoideocerussatus voucher He2820 28S ribosomal RNA gene, partial sequence blastn 39484 667 0.992503748125937 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Stereaceae Aleurodiscus Aleurodiscus dextrinoideocerussatus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;