RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA576995" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA576995 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10765084 10765084 PRJNA576995_P_NODE_36669_length_249_cov_0.875000_g36077_i0 PRJNA576995 36669 249 0.875 2.17875 Enchytraeus buchholzi 34589 Annelida Annelida 449 6.840000000000001e-122   NTclustered gi|2868818994|dbj|LC855137.1| 34589 g36077 i0 99.197 20.8192771084337 249 2 100 0 1 249 103 351 Enchytraeus buchholzi IDEA_Annelid009 gene for 28S rRNA, partial sequence blastn 5184 449 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Enchytraeida Enchytraeidae Enchytraeus Enchytraeus buchholzi
15863671 15863671 PRJNA576995_P_NODE_7053_length_600_cov_1.077799_g6469_i0 PRJNA576995 7053 600 1.077799 6.466794 Hirudo verbana 311461 Annelida Annelida 58.4 0.001   NTclustered gi|2918369620|emb|OZ237782.1| 311461 g6469 i0 94.737 1.125 38 1 6 1 99 136 11765341 11765377 Hirudo verbana genome assembly, chromosome: 4 blastn 675 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;