RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA576995" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA576995 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3111443 3111443 PRJNA576995_P_NODE_19423_length_342_cov_0.895911_g18831_i0 PRJNA576995 19423 342 0.895911 3.06401562 Synechococcus sp. CB0101 232348 Bacteria Bacteria 52.8 0.032   NTclustered gi|1626690261|gb|CP039373.1| 232348 g18831 i0 100 0.0818713450292398 28 0 8 0 222 249 1687046 1687073 Synechococcus sp. CB0101 chromosome, complete genome blastn 28 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp. CB0101
4388011 4388011 PRJNA576995_P_NODE_1844_length_1167_cov_3.225777_g1548_i0 PRJNA576995 1844 1167 3.225777 37.64481759 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 918 0   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g1548 i0 85.553 110.059982862039 886 118 83 7 288 1167 3681231 3682112 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 128440 918 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
18412965 18412965 PRJNA576995_P_NODE_9295_length_511_cov_5.762557_g8705_i0 PRJNA576995 9295 511 5.762557 29.44666627 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 448 5.4599999999999985e-121   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g8705 i0 82.979 303.344422700587 517 66 99 19 3 507 3682154 3682660 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 155009 448 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;