RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA575566" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA575566 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
560092 560092 PRJNA575566_P_NODE_21221_length_227_cov_1.156627_g21024_i0 PRJNA575566 21221 227 1.156627 2.62554329 Dysidea avara 196820 Porifera other_Eukaryota 62.1 3.36e-5   NTclustered gi|2749576058|ref|XM_066054339.1| 196820 g21024 i0 94.872 0.171806167400881 39 2 17 0 188 226 918 956 PREDICTED: Dysidea avara pseudouridylate synthase 7 homolog (LOC136260550), mRNA blastn 39 62.1 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
10764540 10764540 PRJNA575566_P_NODE_8689_length_355_cov_3.241497_g8492_i0 PRJNA575566 8689 355 3.241497 11.50731435 Pseudocorticium jarrei 61082 Porifera other_Eukaryota 113 1.52e-20   NTclustered gi|308912677|gb|HQ269357.1| 61082 g8492 i0 89.011 17.4225352112676 91 10 26 0 265 355 12569 12479 Pseudocorticium jarrei isolate DL028 mitochondrion, complete genome blastn 6185 113 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Pseudocorticium Pseudocorticium jarrei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;