RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA575566" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA575566 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7514505 7514505 PRJNA575566_P_NODE_14106_length_280_cov_1.168950_g13909_i0 PRJNA575566 14106 280 1.16895 3.27306 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 209 1.45e-49   NTclustered gi|341925955|dbj|AB610878.1| 6161 g13909 i0 82.143 88.8535714285714 252 37 89 8 31 278 1031 1278 Dugesia japonica Djtuba mRNA for tubulin alpha chain, complete cds blastn 24879 209 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
10764279 10764279 PRJNA575566_P_NODE_18649_length_243_cov_2.730769_g18452_i0 PRJNA575566 18649 243 2.730769 6.63576867 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 377 3.18e-100   NTclustered gi|926460157|gb|KR132223.1| 282301 g18452 i0 94.65 1 243 13 100 0 1 243 287 529 Macrostomum lignano clone c100550_g1_i1 mRNA sequence blastn 243 377 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;