RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA575566" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA575566 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5663692 5663692 PRJNA575566_P_NODE_14825_length_274_cov_0.901408_g14628_i0 PRJNA575566 14825 274 0.901408 2.46985792 Lobosporangium transversale 64571 Fungi Fungi 152 2.41e-32   NTclustered gi|1227135532|ref|XM_022023617.1| 64571 g14628 i0 87.313 9.10948905109489 134 15 49 2 7 139 77 209 Lobosporangium transversale ribosomal protein S8e/ribosomal biogenesis NSA2 (BCR41DRAFT_350162), mRNA blastn 2496 152 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
12039154 12039154 PRJNA575566_P_NODE_22370_length_219_cov_2.430380_g22173_i0 PRJNA575566 22370 219 2.43038 5.3225322 Rhizomucor pusillus 4840 Fungi Fungi 104 5.27e-18   NTclustered gi|2837719516|ref|XM_069386056.1| 4840 g22173 i0 84.615 49.2374429223744 104 16 47 0 83 186 539 436 Rhizomucor pusillus 60S ribosomal protein uL6 (VTP01DRAFT_7083), partial mRNA blastn 10783 104 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
12039199 12039199 PRJNA575566_P_NODE_25190_length_208_cov_0.870748_g24993_i0 PRJNA575566 25190 208 0.870748 1.81115584 Gilbertella persicaria 101096 Fungi Fungi 141 3.78e-29   NTclustered gi|2323759312|ref|XM_051582073.1| 101096 g24993 i0 86.154 2.59134615384615 130 18 63 0 79 208 656 527 Gilbertella persicaria cytochrome b-c1 complex subunit Rieske (B0P05DRAFT_581111), partial mRNA blastn 539 141 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
23512395 23512395 PRJNA575566_P_NODE_21399_length_226_cov_1.163636_g21202_i0 PRJNA575566 21399 226 1.163636 2.62981736 Halteromyces radiatus 101107 Fungi Fungi 56.5 0.002   NTclustered gi|2323759506|ref|XM_051542788.1| 101107 g21202 i0 94.444 0.300884955752212 36 2 16 0 43 78 1279 1314 Halteromyces radiatus uncharacterized protein (BX664DRAFT_318185), partial mRNA blastn 68 56.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;