RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA575566" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA575566 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1835384 1835384 PRJNA575566_P_NODE_16202_length_262_cov_1.273632_g16005_i0 PRJNA575566 16202 262 1.273632 3.33691584 Cutaneotrichosporon oleaginosum 879819 Fungi Fungi 195 3.75e-45   NTclustered gi|1071042533|ref|XM_018426560.1| 879819 g16005 i0 82.018 20.8053435114504 228 41 87 0 2 229 450 223 Cutaneotrichosporon oleaginosum 60S ribosomal protein eL19 (COLE_06920), partial mRNA blastn 5451 195 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Cutaneotrichosporon Cutaneotrichosporon oleaginosum
4387330 4387330 PRJNA575566_P_NODE_10044_length_330_cov_1.003717_g9847_i0 PRJNA575566 10044 330 1.003717 3.3122661 Tilletiopsis washingtonensis 58919 Fungi Fungi 128 5.02e-25   NTclustered gi|1423575308|ref|XM_025742166.1| 58919 g9847 i0 84.328 0.745454545454545 134 17 40 4 31 161 213 345 Tilletiopsis washingtonensis putative 40s ribosomal protein s20 (FA09DRAFT_329402), mRNA blastn 246 128 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis
4387444 4387444 PRJNA575566_P_NODE_17724_length_250_cov_1.354497_g17527_i0 PRJNA575566 17724 250 1.354497 3.3862425 Pseudozyma flocculosa 84751 Fungi Fungi 172 1.67e-38   NTclustered gi|630968635|ref|XM_007882535.1| 1277687 g17527 i0 82.412 52.012 199 33 79 2 1 198 244 47 Pseudozyma flocculosa PF-1 uncharacterized protein (PFL1_05006), partial mRNA blastn 13003 172 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Pseudozyma Pseudozyma flocculosa
13890774 13890774 PRJNA575566_P_NODE_25131_length_208_cov_0.870748_g24934_i0 PRJNA575566 25131 208 0.870748 1.81115584 Ustilaginaceae 5268 Fungi Fungi 385 1.58e-102   NTclustered gi|1358186638|gb|MH047195.1| 5270 g24934 i0 100 97.4855769230769 208 0 100 0 1 208 4565 4358 Mycosarcoma maydis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20277 385 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Mycosarcoma Mycosarcoma maydis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;