RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA573544" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA573544 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12038495 12038495 PRJNA573544_P_NODE_5090_length_256_cov_1.732240_g5072_i0 PRJNA573544 5090 256 1.73224 4.4345344 Ripella sp. 805 1217113 Discosea other_Eukaryota 374 4.369999999999998e-99   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g5072 i0 93.75 100.47265625 256 4 100 5 1 256 788 545 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 25721 374 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
20961497 20961497 PRJNA573544_P_NODE_2157_length_364_cov_4.024055_g2139_i0 PRJNA573544 2157 364 4.024055 14.6475602 Ripella sp. GP2 1217115 Discosea other_Eukaryota 571 2.1399999999999996e-158   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g2139 i0 95.304 98.6758241758242 362 13 99 4 1 362 14 371 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 35918 571 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;