RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA572587" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA572587 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12037675 12037675 PRJNA572587_P_NODE_11670_length_343_cov_7.751701_g11342_i0 PRJNA572587 11670 343 7.751701 26.58833443 Nitrosopumilus zosterae 718286 Archaea Archaea 206 2.35e-48   NTclustered gi|2289589374|dbj|AP026695.1| 718286 g11342 i0 80.216 5.77842565597668 278 51 80 4 33 307 1125797 1125521 Nitrosopumilus zosterae NM25 DNA, complete genome blastn 1982 206 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus zosterae
24785206 24785206 PRJNA572587_P_NODE_35020_length_186_cov_12.014599_g34692_i0 PRJNA572587 35020 186 12.014599 22.34715414 Candidatus Nitrosopumilus sp. SW 2508726 Archaea Archaea 130 7.14e-26   NTclustered gi|1699461107|gb|CP035425.1| 2508726 g34692 i0 80.982 0.876344086021505 163 31 88 0 1 163 335158 334996 Candidatus Nitrosopumilus sp. SW chromosome, complete genome blastn 163 130 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Candidatus Nitrosopumilus sp. SW

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;