RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA565778" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565778 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5662287 5662287 PRJNA565778_S_NODE_8325_length_373_cov_3.366071_g8031_i0 PRJNA565778 8325 373 3.366071 12.55544483 Anemonia sulcata 6108 Cnidaria other_Eukaryota 69.4 3.52e-7   NTclustered gi|2917940696|emb|OZ237557.1| 6108 g8031 i0 82.143 301.833780160858 84 11 21 2 229 308 2830730 2830813 Anemonia sulcata genome assembly, chromosome: 3 blastn 112584 69.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
9486541 9486541 PRJNA565778_S_NODE_18628_length_256_cov_215.890411_g18332_i0 PRJNA565778 18628 256 215.890411 552.67945216 Anemonia sulcata 6108 Cnidaria other_Eukaryota 65.8 2.99e-6   NTclustered gi|2917940759|emb|OZ237572.1| 6108 g18332 i0 95.122 0.74609375 41 2 16 0 116 156 5752933 5752893 Anemonia sulcata genome assembly, chromosome: 18 blastn 191 65.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
23510610 23510610 PRJNA565778_S_NODE_22239_length_235_cov_1.525253_g21943_i0 PRJNA565778 22239 235 1.525253 3.58434455 Trachyphyllia geoffroyi 196280 Cnidaria other_Eukaryota 429 8.33e-116   NTclustered gi|23503507|dbj|AB085641.1| 196280 g21943 i0 99.574 5 235 1 100 0 1 235 300 534 Trachyphyllia geoffroyi mRNA for Kaede, complete cds blastn 1175 429 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Trachyphyllia Trachyphyllia geoffroyi
24087791 24087791 PRJNA565778_S_NODE_7419_length_392_cov_102.123944_g7134_i0 PRJNA565778 7419 392 102.123944 400.32586048 Montipora 46703 Cnidaria other_Eukaryota 52.8 0.037   NTclustered gi|2812154001|ref|XM_068889629.1| 246305 g7134 i0 100 0.571428571428571 28 0 7 0 23 50 1550 1523 PREDICTED: Montipora capricornis galanin receptor type 1-like (LOC138043384), mRNA blastn 224 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;