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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA565778" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 20 ✖

bioproject 1

  • PRJNA565778 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1135859 1135859 PRJNA565778_S_NODE_41301_length_158_cov_2.991736_g41005_i0 PRJNA565778 41301 158 2.991736 4.72694288 root 1 Root_unresolved Root_unresolved 180 5.74e-41   NTclustered gi|166046530|emb|CU367647.1| 100861 g41005 i0 100 61.7215189873418 97 0 87 0 1 97 615 711 Aphanomyces euteiches cDNA blastn 9752 180 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
3109365 3109365 PRJNA565778_S_NODE_4943_length_465_cov_7.612150_g4709_i0 PRJNA565778 4943 465 7.61215 35.3964975 Analipus japonicus 31333 SAR_Eukaryotes SAR_Eukaryotes 63.9 2.09e-5   NTclustered gi|2049955473|gb|MZ156065.1| 31333 g4709 i0 97.297 0.0795698924731183 37 1 8 0 287 323 34797 34761 Analipus japonicus mitochondrion, complete genome blastn 37 63.9 1 Eukaryota Sar     Phaeophyceae Ralfsiales Ralfsiaceae Analipus Analipus japonicus
4963891 4963891 PRJNA565778_S_NODE_31284_length_196_cov_4.100629_g30988_i0 PRJNA565778 31284 196 4.100629 8.03723284 root 1 Root_unresolved Root_unresolved 254 4.33e-63   NTclustered gi|166044547|emb|CU367456.1| 100861 g30988 i0 99.291 14.1020408163265 141 0 72 1 22 162 169 30 Aphanomyces euteiches cDNA blastn 2764 254 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
5661984 5661984 PRJNA565778_S_NODE_23225_length_229_cov_114.614583_g22929_i0 PRJNA565778 23225 229 114.614583 262.46739507 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 339 1.4e-88   NTclustered gi|328802538|emb|FR832890.1| 890382 g22929 i0 98.438 85.5196506550218 192 3 84 0 1 192 1014 1205 Albugo laibachii Nc14, mitochondrial genomic contig NODE_36_length_2553_cov_1396.121460 blastn 19584 339 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
7513665 7513665 PRJNA565778_S_NODE_31306_length_196_cov_3.144654_g31010_i0 PRJNA565778 31306 196 3.144654 6.16352184 root 1 Root_unresolved Root_unresolved 252 1.56e-62   NTclustered gi|166046607|emb|CU367724.1| 100861 g31010 i0 99.281 9.74489795918367 139 1 71 0 21 159 360 498 Aphanomyces euteiches cDNA blastn 1910 252 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
8211387 8211387 PRJNA565778_S_NODE_34187_length_186_cov_245.879195_g33891_i0 PRJNA565778 34187 186 245.879195 457.3353027 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 254 4.06e-63   NTclustered gi|166046594|emb|CU367711.1| 100861 g33891 i0 97.959 14.7688172043011 147 2 78 1 11 156 485 339 Aphanomyces euteiches cDNA blastn 2747 254 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
10064337 10064337 PRJNA565778_S_NODE_40328_length_163_cov_3.500000_g40032_i0 PRJNA565778 40328 163 3.5 5.705 root 1 Root_unresolved Root_unresolved 265 1.6e-66   NTclustered gi|166044518|emb|CU367427.1| 100861 g40032 i0 99.32 30.4049079754601 147 0 90 1 6 151 346 492 Aphanomyces euteiches cDNA blastn 4956 265 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
10762673 10762673 PRJNA565778_S_NODE_33949_length_187_cov_9.000000_g33653_i0 PRJNA565778 33949 187 9 16.83 Philasterides dicentrarchi 282688 SAR_Eukaryotes SAR_Eukaryotes 235 1.4799999999999998e-57   NTclustered gi|49616744|gb|AY643504.1| 282688 g33653 i0 90.857 93.7700534759358 175 16 94 0 1 175 301 127 Philasterides dicentrarchi 26S ribosomal RNA gene, partial sequence blastn 17535 235 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
10762777 10762777 PRJNA565778_S_NODE_43029_length_150_cov_3.840708_g42733_i0 PRJNA565778 43029 150 3.840708 5.761062 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 268 1.11e-67   NTclustered gi|194245783|gb|EU828456.1| 5888 g42733 i0 98.684 95.2466666666667 152 0 100 1 1 150 3164 3013 Paramecium tetraurelia large subunit ribosomal RNA gene, complete sequence blastn 14287 268 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
11339039 11339039 PRJNA565778_S_NODE_40429_length_163_cov_1.484127_g40133_i0 PRJNA565778 40429 163 1.484127 2.41912701 root 1 Root_unresolved Root_unresolved 257 2.68e-64   NTclustered gi|166044533|emb|CU367442.1| 100861 g40133 i0 100 38.5705521472393 139 0 85 0 3 141 651 513 Aphanomyces euteiches cDNA blastn 6287 257 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
12614801 12614801 PRJNA565778_S_NODE_29690_length_201_cov_306.585366_g29394_i0 PRJNA565778 29690 201 306.585366 616.23658566 root 1 Root_unresolved Root_unresolved 291 3.4e-74   NTclustered gi|166044652|emb|CU367561.1| 100861 g29394 i0 100 77.6019900497512 157 0 78 0 9 165 403 247 Aphanomyces euteiches cDNA blastn 15598 291 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
12614841 12614841 PRJNA565778_S_NODE_38450_length_173_cov_2.992647_g38154_i0 PRJNA565778 38450 173 2.992647 5.17727931 root 1 Root_unresolved Root_unresolved 196 6.339999999999999e-46   NTclustered gi|166046788|emb|CU367363.1| 100861 g38154 i0 99.083 17.7630057803468 109 1 82 0 65 173 539 431 Aphanomyces euteiches cDNA blastn 3073 196 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
13889836 13889836 PRJNA565778_S_NODE_34111_length_187_cov_1.493333_g33815_i0 PRJNA565778 34111 187 1.493333 2.79253271 Guttulinopsis 1144921 SAR_Eukaryotes SAR_Eukaryotes 346 6.56e-91   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g33815 i0 100 8.56149732620321 187 0 100 0 1 187 1047 861 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 1601 346 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
15163958 15163958 PRJNA565778_S_NODE_43072_length_150_cov_2.654867_g42776_i0 PRJNA565778 43072 150 2.654867 3.9823005 Xanthophyceae 2833 SAR_Eukaryotes SAR_Eukaryotes 202 1.15e-47   NTclustered gi|223029651|gb|FJ030881.1| 243652 g42776 i0 90.85 100.246666666667 153 10 100 3 1 150 1428 1277 Chlorellidium tetrabotrys strain SAG811-1 28S ribosomal RNA gene, partial sequence blastn 15037 202 1 Eukaryota Sar     Xanthophyceae Mischococcales Botryochloridaceae Chlorellidium Chlorellidium tetrabotrys
16438507 16438507 PRJNA565778_S_NODE_8193_length_375_cov_32.923077_g7900_i0 PRJNA565778 8193 375 32.923077 123.46153875 root 1 Root_unresolved Root_unresolved 599 1.0199999999999998e-166   NTclustered gi|166046508|emb|CU367625.1| 100861 g7900 i0 100 86.3866666666667 324 0 86 0 35 358 436 113 Aphanomyces euteiches cDNA blastn 32395 599 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
17713647 17713647 PRJNA565778_S_NODE_18114_length_260_cov_3.914798_g17818_i0 PRJNA565778 18114 260 3.9147979999999998 10.1784748 root 1 Root_unresolved Root_unresolved 411 3.39e-110   NTclustered gi|166046727|emb|CU367837.1| 100861 g17818 i0 99.558 86.9230769230769 226 0 87 1 34 259 548 772 Aphanomyces euteiches cDNA blastn 22600 411 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
18410306 18410306 PRJNA565778_S_NODE_36635_length_179_cov_4.112676_g36339_i0 PRJNA565778 36635 179 4.1126760000000004 7.36169004 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 143 8.75e-30   NTclustered gi|1402550488|gb|MH488774.1| 2231170 g36339 i0 98.765 34.4916201117318 81 0 45 1 68 147 2216 2136 Guttulinopsis rogosa isolate FOLDEDA sequence blastn 6174 143 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
22235164 22235164 PRJNA565778_S_NODE_13058_length_304_cov_6.681648_g12762_i0 PRJNA565778 13058 304 6.681648 20.31220992 Peronospora rumicis 162101 SAR_Eukaryotes SAR_Eukaryotes 562 1.06e-155   NTclustered gi|511773433|gb|KC495032.1| 162101 g12762 i0 100 99.8782894736842 304 0 100 0 1 304 4 307 Peronospora rumicis isolate HV312 28S ribosomal RNA gene, partial sequence blastn 30363 562 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora rumicis
22235286 22235286 PRJNA565778_S_NODE_21358_length_239_cov_261.935644_g21062_i0 PRJNA565778 21358 239 261.935644 626.02618916 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 351 1.89e-92   NTclustered gi|166046788|emb|CU367363.1| 100861 g21062 i0 99.482 78.2887029288703 193 1 81 0 12 204 193 385 Aphanomyces euteiches cDNA blastn 18711 351 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
22235443 22235443 PRJNA565778_S_NODE_33898_length_187_cov_78.353333_g33602_i0 PRJNA565778 33898 187 78.353333 146.52073271 Nitzschia dissipata 303402 SAR_Eukaryotes SAR_Eukaryotes 139 1.19e-28   NTclustered gi|2248495830|ref|NC_063456.1| 303402 g33602 i0 90.476 32.8983957219251 105 10 56 0 1 105 36373 36477 Nitzschia dissipata isolate Qingdao in China mitochondrion, complete genome blastn 6152 139 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia dissipata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;