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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA565584" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 16 ✖

bioproject 1

  • PRJNA565584 · 16 ✖

analysis 1

  • blastn · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
556414 556414 PRJNA565584_P_NODE_223461_length_211_cov_6.000000_g222309_i0 PRJNA565584 223461 211 6 12.66 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 60.2 1.11e-4   NTclustered gi|2156401361|dbj|AP024486.1| 2250274 g222309 i0 94.872 15.6018957345972 39 1 18 1 137 175 398142 398179 Candidatus Micrarchaeota archaeon ARM-1 DNA, complete genome blastn 3292 60.2 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
4383319 4383319 PRJNA565584_P_NODE_18204_length_751_cov_2.967552_g17118_i0 PRJNA565584 18204 751 2.967552 22.28631552 uncultured Candidatus Woesearchaeota archaeon 2014372 Archaea Archaea 54.7 0.021   NTclustered gi|2874254013|emb|OY970338.1| 2014372 g17118 i0 100 0.0386151797603196 29 0 4 0 482 510 1649890 1649862 MAG: uncultured Candidatus Woesearchaeota archaeon isolate MFD02416.bin.c.18 genome assembly, chromosome: 1 blastn 29 54.7 1 Archaea   Nanobdellati Candidatus Woesearchaeota         uncultured Candidatus Woesearchaeota archaeon
6933865 6933865 PRJNA565584_P_NODE_182286_length_248_cov_0.880000_g181134_i0 PRJNA565584 182286 248 0.88 2.1824 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 394 3.24e-105   NTclustered gi|937513727|gb|CP012850.1| 1353260 g181134 i0 95.528 0.991935483870968 246 11 99 0 1 246 813503 813748 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 246 394 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
8208830 8208830 PRJNA565584_P_NODE_187207_length_247_cov_0.885057_g186055_i0 PRJNA565584 187207 247 0.885057 2.18609079 Thermococcus nautili 195522 Archaea Archaea 58.4 4.8e-4   NTclustered gi|589908590|gb|CP007264.1| 195522 g186055 i0 94.595 0.299595141700405 37 2 15 0 47 83 1465177 1465141 Thermococcus nautili strain 30-1, complete genome blastn 74 58.4 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus nautili
8786754 8786754 PRJNA565584_P_NODE_128147_length_276_cov_2.822660_g126995_i0 PRJNA565584 128147 276 2.82266 7.7905416 root 1 Root_unresolved Root_unresolved 510 3.48e-140   NTclustered gi|216917|dbj|D12983.1|PYWPOL 2261 g126995 i0 100 6 276 0 100 0 1 276 1339 1064 Pyrococcus furiosus pol gene for DNA polymerase, complete cds blastn 1656 510 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
9482845 9482845 PRJNA565584_P_NODE_111808_length_287_cov_1.350467_g110656_i0 PRJNA565584 111808 287 1.350467 3.87584029 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 58.4 5.7e-4   NTclustered gi|937513727|gb|CP012850.1| 1353260 g110656 i0 100 0.205574912891986 31 0 11 0 201 231 128547 128577 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 59 58.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
10760515 10760515 PRJNA565584_P_NODE_207069_length_242_cov_3.242604_g205917_i0 PRJNA565584 207069 242 3.242604 7.84710168 Halalkalicoccus jeotgali 413810 Archaea Archaea 294 3.28e-75   NTclustered gi|299123054|gb|CP002062.1| 795797 g205917 i0 88.75 0.991735537190083 240 27 99 0 1 240 1108912 1108673 Halalkalicoccus jeotgali B3, complete genome blastn 240 294 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
11338177 11338177 PRJNA565584_P_NODE_41229_length_466_cov_6.676845_g40078_i0 PRJNA565584 41229 466 6.676845 31.1140977 root 1 Root_unresolved Root_unresolved 828 0   NTclustered gi|216917|dbj|D12983.1|PYWPOL 2261 g40078 i0 99.778 7.27896995708154 451 1 97 0 16 466 340 790 Pyrococcus furiosus pol gene for DNA polymerase, complete cds blastn 3392 828 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
12614534 12614534 PRJNA565584_P_NODE_85750_length_321_cov_1.241935_g84598_i0 PRJNA565584 85750 321 1.241935 3.98661135 Archaea 2157 Archaea Archaea 69.4 2.99e-7   NTclustered gi|2874253858|emb|OY969914.1| 176233 g84598 i0 84.722 47.1028037383178 72 7 22 4 219 288 2030610 2030679 MAG: uncultured Methanobacteriaceae archaeon isolate MFD02416.bin.1.248 genome assembly, chromosome: 1 blastn 15120 69.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae   uncultured Methanobacteriaceae archaeon
13310334 13310334 PRJNA565584_P_NODE_215931_length_241_cov_0.916667_g214779_i0 PRJNA565584 215931 241 0.916667 2.20916747 Halalkalicoccus salilacus 3117459 Archaea Archaea 60.2 1.3e-4   NTclustered gi|2674869203|gb|CP144461.1| 3117459 g214779 i0 85.965 0.236514522821577 57 6 23 2 168 223 100521 100466 Halalkalicoccus salilacus strain FCH27 chromosome, complete genome blastn 57 60.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus salilacus
17135559 17135559 PRJNA565584_P_NODE_92794_length_310_cov_2.569620_g91642_i0 PRJNA565584 92794 310 2.56962 7.965822 Halorubrum salinarum 2739057 Archaea Archaea 195 4.5499999999999995e-45   NTclustered gi|1848526000|gb|CP053941.1| 2739057 g91642 i0 90 46.3677419354839 150 15 48 0 1 150 991953 992102 Halorubrum salinarum strain RHB-C chromosome, complete genome blastn 14374 195 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum salinarum
18406346 18406346 PRJNA565584_P_NODE_104935_length_292_cov_1.347032_g103783_i0 PRJNA565584 104935 292 1.347032 3.93333344 Methanosarcina siciliae 38027 Archaea Archaea 75 5.78e-9   NTclustered gi|805350375|gb|CP009507.1| 1434119 g103783 i0 95.652 0.407534246575342 46 2 16 0 68 113 773124 773079 Methanosarcina siciliae HI350, complete genome blastn 119 75 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina siciliae
19682264 19682264 PRJNA565584_P_NODE_184236_length_248_cov_0.880000_g183084_i0 PRJNA565584 184236 248 0.88 2.1824 Candidatus Nitrososphaera evergladensis 1459637 Archaea Archaea 52.8 0.022   NTclustered gi|665992324|gb|CP007174.1| 1459636 g183084 i0 100 0.112903225806452 28 0 11 0 44 71 583202 583175 Candidatus Nitrososphaera evergladensis SR1, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Candidatus Nitrososphaera evergladensis
19682754 19682754 PRJNA565584_P_NODE_215336_length_241_cov_0.916667_g214184_i0 PRJNA565584 215336 241 0.916667 2.20916747 Halorubrum salinarum 2739057 Archaea Archaea 58.4 4.66e-4   NTclustered gi|1848526000|gb|CP053941.1| 2739057 g214184 i0 97.059 0.141078838174274 34 1 14 0 134 167 2894212 2894245 Halorubrum salinarum strain RHB-C chromosome, complete genome blastn 34 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum salinarum
20957652 20957652 PRJNA565584_P_NODE_163897_length_253_cov_1.505556_g162745_i0 PRJNA565584 163897 253 1.505556 3.80905668 Methanocaldococcus infernus 67760 Archaea Archaea 52.8 0.023   NTclustered gi|295433502|gb|CP002009.1| 573063 g162745 i0 100 0.110671936758893 28 0 11 0 75 102 977082 977109 Methanocaldococcus infernus ME, complete genome blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus infernus
25361496 25361496 PRJNA565584_P_NODE_51560_length_414_cov_1.862170_g50409_i0 PRJNA565584 51560 414 1.86217 7.7093838 Nitrososphaera 497726 Archaea Archaea 52.8 0.04   NTclustered gi|647810480|gb|CP007536.1| 926571 g50409 i0 100 0.202898550724638 28 0 7 0 159 186 2040378 2040351 Nitrososphaera viennensis EN76, complete genome blastn 84 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera viennensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;