contig_metadata
22 rows where analysis = "blastn", bioproject = "PRJNA565584" and tax_phylum = "Tubulinea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3107842 | 3107842 | PRJNA565584_P_NODE_43683_length_452_cov_2.153034_g42532_i0 | PRJNA565584 | 43683 | 452 | 2.153034 | 9.73171368 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 556 | 7.61e-154 | NTclustered | gi|423291976|gb|JQ519433.1| | 5778 | g42532 | i0 | 88.914 | 99.9800884955752 | 451 | 50 | 99 | 0 | 2 | 452 | 592 | 142 | Vermamoeba vermiformis clone JG10.93_b2 actin gene, partial cds | blastn | 45191 | 556 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 6934713 | 6934713 | PRJNA565584_P_NODE_27646_length_587_cov_0.838521_g26505_i0 | PRJNA565584 | 27646 | 587 | 0.838521 | 4.92211827 | Polychaos sp. OK-2023a | 3107887 | Tubulinea | other_Eukaryota | 697 | 0 | NTclustered | gi|2634048133|gb|OR947210.1| | 3107887 | g26505 | i0 | 88.127 | 51.2350936967632 | 598 | 56 | 100 | 11 | 1 | 587 | 1401 | 1994 | Polychaos sp. OK-2023a small subunit ribosomal RNA gene, partial sequence | blastn | 30075 | 697 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Polychaos | Polychaos sp. OK-2023a | ||
| 6935376 | 6935376 | PRJNA565584_P_NODE_5906_length_1409_cov_2.776946_g5286_i0 | PRJNA565584 | 5906 | 1409 | 2.776946 | 39.12716914 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 1133 | 0 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g5286 | i0 | 81.792 | 6.31156848828957 | 1384 | 222 | 97 | 22 | 1 | 1360 | 8 | 1385 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 8893 | 1133 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 7512879 | 7512879 | PRJNA565584_P_NODE_43346_length_454_cov_1.763780_g42195_i0 | PRJNA565584 | 43346 | 454 | 1.76378 | 8.0075612 | Saccamoeba | 136463 | Tubulinea | other_Eukaryota | 833 | 0 | NTclustered | gi|399764206|gb|JQ271717.1| | 1215623 | g42195 | i0 | 99.78 | 95.0022026431718 | 454 | 1 | 100 | 0 | 1 | 454 | 1647 | 1194 | Saccamoeba sp. DP7 18S ribosomal RNA gene, partial sequence | blastn | 43131 | 833 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Saccamoeba | Saccamoeba sp. DP7 | ||
| 9485024 | 9485024 | PRJNA565584_P_NODE_30368_length_555_cov_1.242739_g29220_i0 | PRJNA565584 | 30368 | 555 | 1.242739 | 6.89720145 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 348 | 6.22e-91 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g29220 | i0 | 78.333 | 3.02882882882883 | 540 | 115 | 97 | 2 | 17 | 555 | 1 | 539 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 1681 | 348 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 10761591 | 10761591 | PRJNA565584_P_NODE_58429_length_389_cov_1.167722_g57278_i0 | PRJNA565584 | 58429 | 389 | 1.167722 | 4.54243858 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 318 | 3.32e-82 | NTclustered | gi|421976355|gb|JQ519494.1| | 5778 | g57278 | i0 | 92.727 | 81.3598971722365 | 220 | 16 | 57 | 0 | 170 | 389 | 794 | 575 | Vermamoeba vermiformis clone JG10.150_g4 elongation factor 2 alpha gene, partial cds | blastn | 31649 | 318 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 13309912 | 13309912 | PRJNA565584_P_NODE_189591_length_246_cov_1.780347_g188439_i0 | PRJNA565584 | 189591 | 246 | 1.780347 | 4.37965362 | Netzelia tuberculata | 1260112 | Tubulinea | other_Eukaryota | 143 | 1.28e-29 | NTclustered | gi|421976361|gb|JQ519497.1| | 1260112 | g188439 | i0 | 77.922 | 1.9390243902439 | 231 | 47 | 93 | 4 | 18 | 246 | 1 | 229 | Netzelia tuberculata clone JG11.58_a3 elongation factor 2 alpha gene, partial cds | blastn | 477 | 143 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Arcellinida | Netzeliidae | Netzelia | Netzelia tuberculata | ||
| 13311035 | 13311035 | PRJNA565584_P_NODE_47431_length_433_cov_1.261111_g46280_i0 | PRJNA565584 | 47431 | 433 | 1.261111 | 5.46061063 | Copromyxa laresi | 1789826 | Tubulinea | other_Eukaryota | 551 | 3.379999999999999e-152 | NTclustered | gi|1042160931|dbj|LC102272.1| | 1789826 | g46280 | i0 | 89.607 | 96.7090069284065 | 433 | 45 | 100 | 0 | 1 | 433 | 20 | 452 | Copromyxa sp. MK-2016 gene for actin, partial cds, strain: ZEB1_cl1 | blastn | 41875 | 551 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa laresi | ||
| 13311807 | 13311807 | PRJNA565584_P_NODE_87851_length_317_cov_1.315574_g86699_i0 | PRJNA565584 | 87851 | 317 | 1.315574 | 4.17036958 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 364 | 3.3599999999999985e-96 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g86699 | i0 | 87.382 | 33.9526813880126 | 317 | 40 | 100 | 0 | 1 | 317 | 362 | 46 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 10763 | 364 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 14585200 | 14585200 | PRJNA565584_P_NODE_219292_length_233_cov_3.362500_g218140_i0 | PRJNA565584 | 219292 | 233 | 3.3625 | 7.834625 | Saccamoeba limax | 136464 | Tubulinea | other_Eukaryota | 154 | 5.56e-33 | NTclustered | gi|213950421|gb|EU869301.1| | 136464 | g218140 | i0 | 82.759 | 9.66094420600858 | 174 | 29 | 74 | 1 | 61 | 233 | 1613 | 1786 | Saccamoeba limax strain NTSHR small subunit ribosomal RNA gene, partial sequence | blastn | 2251 | 154 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Saccamoeba | Saccamoeba limax | ||
| 14585696 | 14585696 | PRJNA565584_P_NODE_40472_length_471_cov_2.919598_g39321_i0 | PRJNA565584 | 40472 | 471 | 2.919598 | 13.75130658 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 560 | 6.15e-155 | NTclustered | gi|423291978|gb|JQ519434.1| | 5778 | g39321 | i0 | 88.553 | 98.1464968152866 | 463 | 51 | 98 | 2 | 9 | 470 | 32 | 493 | Vermamoeba vermiformis clone JG10.93_e2 actin gene, partial cds | blastn | 46227 | 560 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 14586478 | 14586478 | PRJNA565584_P_NODE_80792_length_331_cov_1.108527_g79641_i0 | PRJNA565584 | 80792 | 331 | 1.108527 | 3.66922437 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 405 | 2.08e-108 | NTclustered | gi|62910949|gb|AY925001.1| | 5778 | g79641 | i0 | 95.294 | 0.897280966767372 | 255 | 12 | 77 | 0 | 1 | 255 | 255 | 1 | Hartmannella vermiformis Rpl7A mRNA, partial cds | blastn | 297 | 405 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 17133145 | 17133145 | PRJNA565584_P_NODE_162854_length_254_cov_1.071823_g161702_i0 | PRJNA565584 | 162854 | 254 | 1.071823 | 2.72243042 | Glaeseria mira | 242547 | Tubulinea | other_Eukaryota | 375 | 1.2e-99 | NTclustered | gi|33946352|gb|AY294155.1| | 242547 | g161702 | i0 | 93.307 | 98.3937007874016 | 254 | 17 | 100 | 0 | 1 | 254 | 502 | 755 | Glaeseria mira actin mRNA, partial cds | blastn | 24992 | 375 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Glaeseria | Glaeseria mira | ||
| 17134579 | 17134579 | PRJNA565584_P_NODE_43674_length_452_cov_2.279683_g42523_i0 | PRJNA565584 | 43674 | 452 | 2.279683 | 10.30416716 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 407 | 8.109999999999999e-109 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g42523 | i0 | 83.962 | 20.5132743362832 | 424 | 68 | 94 | 0 | 2 | 425 | 424 | 1 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 9272 | 407 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 17711729 | 17711729 | PRJNA565584_P_NODE_119734_length_282_cov_1.301435_g118582_i0 | PRJNA565584 | 119734 | 282 | 1.301435 | 3.6700467 | Elardia | 2681632 | Tubulinea | other_Eukaryota | 244 | 4e-60 | NTclustered | gi|33946358|gb|AY294158.1| | 239731 | g118582 | i0 | 82.456 | 67.4503546099291 | 285 | 44 | 100 | 6 | 1 | 282 | 852 | 571 | Hartmannella cantabrigiensis actin mRNA, complete cds | blastn | 19021 | 244 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Hartmannella | Hartmannella cantabrigiensis | ||
| 18409629 | 18409629 | PRJNA565584_P_NODE_83755_length_325_cov_1.154762_g82603_i0 | PRJNA565584 | 83755 | 325 | 1.154762 | 3.7529765 | uncultured Lobosea | 282480 | Tubulinea | other_Eukaryota | 270 | 7.74e-68 | NTclustered | gi|49356809|gb|AY605213.1| | 282480 | g82603 | i0 | 87.137 | 45.0738461538462 | 241 | 27 | 74 | 3 | 1 | 240 | 668 | 905 | Uncultured Lobosea clone Sey078 small subunit ribosomal RNA gene, partial sequence | blastn | 14649 | 270 | 1 | Eukaryota | Amoebozoa | Tubulinea | uncultured Lobosea | ||||||
| 18985658 | 18985658 | PRJNA565584_P_NODE_175075_length_249_cov_3.125000_g173923_i0 | PRJNA565584 | 175075 | 249 | 3.125 | 7.78125 | Vermamoeba | 1260114 | Tubulinea | other_Eukaryota | 460 | 3.16e-125 | NTclustered | gi|909719645|gb|KT185625.1| | 5778 | g173923 | i0 | 100 | 47.7791164658635 | 249 | 0 | 100 | 0 | 1 | 249 | 5484 | 5236 | Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence | blastn | 11897 | 460 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 20960015 | 20960015 | PRJNA565584_P_NODE_9117_length_1125_cov_28.421103_g8242_i0 | PRJNA565584 | 9117 | 1125 | 28.421103 | 319.73740875 | Hartmannella cantabrigiensis | 239731 | Tubulinea | other_Eukaryota | 944 | 0 | NTclustered | gi|33946358|gb|AY294158.1| | 239731 | g8242 | i0 | 81.89 | 91.6231111111111 | 1132 | 193 | 100 | 11 | 1 | 1125 | 1137 | 11 | Hartmannella cantabrigiensis actin mRNA, complete cds | blastn | 103076 | 944 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Hartmannella | Hartmannella cantabrigiensis | ||
| 22232975 | 22232975 | PRJNA565584_P_NODE_188178_length_247_cov_0.885057_g187026_i0 | PRJNA565584 | 188178 | 247 | 0.885057 | 2.18609079 | Cryptodifflugia operculata | 1078836 | Tubulinea | other_Eukaryota | 99 | 2.83e-16 | NTclustered | gi|345452568|gb|JF694302.1| | 1078836 | g187026 | i0 | 89.744 | 1.69230769230769 | 78 | 7 | 31 | 1 | 153 | 229 | 44 | 121 | Cryptodifflugia operculata clone 6 actin gene, partial cds | blastn | 418 | 99 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Arcellinida | Cryptodifflugiidae | Cryptodifflugia | Cryptodifflugia operculata | ||
| 22234923 | 22234923 | PRJNA565584_P_NODE_9118_length_1125_cov_15.470532_g8242_i1 | PRJNA565584 | 9118 | 1125 | 15.470532 | 174.043485 | Hartmannella cantabrigiensis | 239731 | Tubulinea | other_Eukaryota | 928 | 0 | NTclustered | gi|33946358|gb|AY294158.1| | 239731 | g8242 | i1 | 81.625 | 94.1626666666667 | 1132 | 196 | 100 | 11 | 1 | 1125 | 11 | 1137 | Hartmannella cantabrigiensis actin mRNA, complete cds | blastn | 105933 | 928 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Hartmannella | Hartmannella cantabrigiensis | ||
| 22234971 | 22234971 | PRJNA565584_P_NODE_9278_length_1115_cov_22.386756_g8242_i2 | PRJNA565584 | 9278 | 1115 | 22.386756 | 249.6123294 | Hartmannella cantabrigiensis | 239731 | Tubulinea | other_Eukaryota | 933 | 0 | NTclustered | gi|33946358|gb|AY294158.1| | 239731 | g8242 | i2 | 81.859 | 93.952466367713 | 1119 | 193 | 99 | 10 | 1 | 1114 | 1137 | 24 | Hartmannella cantabrigiensis actin mRNA, complete cds | blastn | 104757 | 933 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Hartmannella | Hartmannella cantabrigiensis | ||
| 24783212 | 24783212 | PRJNA565584_P_NODE_47220_length_434_cov_1.121884_g46069_i0 | PRJNA565584 | 47220 | 434 | 1.121884 | 4.86897656 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 375 | 2.19e-99 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g46069 | i0 | 82.979 | 8.57834101382488 | 423 | 64 | 97 | 6 | 9 | 427 | 419 | 1 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 3723 | 375 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;