RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA565584" and tax_phylum = "Tardigrada"

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tax_superkingdom 1

tax_phylum 1

  • Tardigrada · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565584 · 1 ✖

analysis 1

  • blastn · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14586507 14586507 PRJNA565584_P_NODE_82432_length_327_cov_2.629921_g81280_i0 PRJNA565584 82432 327 2.629921 8.59984167 Paramacrobiotus metropolitanus 2943436 Tardigrada other_Eukaryota 52.8 0.031   NTclustered gi|2493409534|ref|XM_055473594.1| 2943436 g81280 i0 92.105 0.116207951070336 38 2 12 1 200 237 339 303 PREDICTED: Paramacrobiotus metropolitanus bone morphogenetic protein 2-like (LOC129582160), mRNA blastn 38 52.8 1 Eukaryota Opisthokonta Metazoa Tardigrada Eutardigrada Parachela Macrobiotidae Paramacrobiotus Paramacrobiotus metropolitanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;