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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA565584" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565584 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1833058 1833058 PRJNA565584_P_NODE_7782_length_1217_cov_10.196678_g7068_i0 PRJNA565584 7782 1217 10.196678 124.09357126 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 1884 0   NTclustered gi|1369885|gb|L78441.1|SCM14332R 6183 g7068 i0 99.328 11.1585866885785 1041 7 86 0 1 1041 1041 1 Schistosoma mansoni 14-3-3-2 mRNA, 3' end of cds blastn 13580 1884 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
4384493 4384493 PRJNA565584_P_NODE_46184_length_439_cov_1.505464_g45033_i0 PRJNA565584 46184 439 1.505464 6.60898696 Stenostomum cf. simplex AW-2018 2495572 Platyhelminthes Platyhelminthes 782 0   NTclustered gi|1532673575|gb|MH663467.1| 2495572 g45033 i0 98.858 9.95671981776765 438 5 99 0 1 438 452 889 Stenostomum cf. simplex AW-2018 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 4371 782 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum cf. simplex AW-2018
6935111 6935111 PRJNA565584_P_NODE_46086_length_439_cov_3.166667_g44935_i0 PRJNA565584 46086 439 3.166667 13.90166813 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 750 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g44935 i0 97.494 1 439 11 100 0 1 439 450 12 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 439 750 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
13311960 13311960 PRJNA565584_P_NODE_96591_length_304_cov_2.000000_g95439_i0 PRJNA565584 96591 304 2 6.08 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 512 1.08e-140   NTclustered gi|28273263|gb|AY157151.1| 52061 g95439 i0 97.659 63.0427631578947 299 5 98 2 8 304 8 306 Stenostomum leucops 28S large subunit ribosomal RNA gene, partial sequence blastn 19165 512 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
14583143 14583143 PRJNA565584_P_NODE_102892_length_294_cov_2.090498_g101740_i0 PRJNA565584 102892 294 2.090498 6.14606412 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 407 5.049999999999999e-109   NTclustered gi|1116517974|gb|AY485340.2| 6183 g101740 i0 98.69 201.91156462585 229 3 78 0 66 294 1 229 Schistosoma mansoni ubiquitin mRNA, partial cds blastn 59362 407 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
17134366 17134366 PRJNA565584_P_NODE_32694_length_532_cov_2.594771_g31544_i0 PRJNA565584 32694 532 2.594771 13.80418172 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 438 3.429999999999999e-118   NTclustered gi|1241842076|gb|MF361131.1| 282301 g31544 i0 83.037 13.7800751879699 507 63 93 17 9 505 3815 3322 Macrostomum lignano strain DV1 mitochondrion, complete genome blastn 7331 438 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
17134789 17134789 PRJNA565584_P_NODE_53554_length_406_cov_2.234234_g52403_i0 PRJNA565584 53554 406 2.234234 9.07099004 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.003   NTclustered gi|690539951|emb|LN092357.1| 99802 g52403 i0 100 0.0738916256157636 30 0 7 0 104 133 3623 3594 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0087927 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
17713308 17713308 PRJNA565584_P_NODE_76754_length_339_cov_1.605263_g75603_i0 PRJNA565584 76754 339 1.605263 5.44184157 Metazoa 33208 Platyhelminthes Platyhelminthes 226 1.7799999999999998e-54   NTclustered gi|56757298|gb|AY815089.1| 6182 g75603 i0 81.588 13.5722713864307 277 47 81 3 3 276 925 650 Schistosoma japonicum SJCHGC01741 protein mRNA, complete cds blastn 4601 226 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
18406293 18406293 PRJNA565584_P_NODE_102035_length_296_cov_0.914798_g100883_i0 PRJNA565584 102035 296 0.914798 2.70780208 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 56.5 0.002   NTclustered gi|2318770121|ref|XM_051216348.1| 6185 g100883 i0 89.13 1.18243243243243 46 4 15 1 8 52 4686 4731 Schistosoma haematobium High mobility group (HMGB2_3), mRNA blastn 350 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
23508090 23508090 PRJNA565584_P_NODE_177059_length_249_cov_0.875000_g175907_i0 PRJNA565584 177059 249 0.875 2.17875 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 54.7 0.006   NTclustered gi|687175304|emb|LN100602.1| 99802 g175907 i0 100 0.116465863453815 29 0 12 0 119 147 2769 2797 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0005338 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
24783097 24783097 PRJNA565584_P_NODE_42040_length_462_cov_1.598972_g40889_i0 PRJNA565584 42040 462 1.598972 7.38725064 Schyzocotyle acheilognathi 135513 Platyhelminthes Platyhelminthes 62.1 7.45e-5   NTclustered gi|1028916002|gb|KX060596.1| 135513 g40889 i0 100 0.569264069264069 33 0 7 0 67 99 6843 6875 Schyzocotyle acheilognathi isolate CH1052 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence blastn 263 62.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Bothriocephalidea Bothriocephalidae Schyzocotyle Schyzocotyle acheilognathi
24784213 24784213 PRJNA565584_P_NODE_98400_length_301_cov_1.750000_g97248_i0 PRJNA565584 98400 301 1.75 5.2675 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.028   NTclustered gi|687765196|emb|LK805249.1| 57078 g97248 i0 100 0.0930232558139535 28 0 9 0 60 87 225 252 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0366411 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;