RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA565584" and tax_phylum = "Nucleocytoviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Nucleocytoviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA565584 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3106525 3106525 PRJNA565584_P_NODE_173023_length_250_cov_0.870056_g171871_i0 PRJNA565584 173023 250 0.870056 2.17514 Cotonvirus japonicum 3059904 Viruses Viruses 189 1.6499999999999999e-43   NTclustered gi|2500766720|ref|NC_079139.1| 2811091 g171871 i0 88.125 13.72 160 17 64 2 92 250 754756 754598 Cotonvirus japonicus DNA, complete genome blastn 3430 189 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Cotonvirus Cotonvirus japonicum
19681772 19681772 PRJNA565584_P_NODE_15456_length_828_cov_1.842384_g14400_i0 PRJNA565584 15456 828 1.842384 15.25493952 Marseillevirus LCMAC102 2506603 Viruses Viruses 54.7 0.023   NTclustered gi|1588059560|gb|MK500334.1| 2506603 g14400 i0 100 0.035024154589372 29 0 4 0 684 712 151460 151432 MAG: Marseillevirus LCMAC102, sequence blastn 29 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Marseilleviridae   Marseillevirus LCMAC102
24782025 24782025 PRJNA565584_P_NODE_183720_length_248_cov_0.880000_g182568_i0 PRJNA565584 183720 248 0.88 2.1824 Moumouvirus sp. 'lavasanguinem' 3138182 Viruses Viruses 65.8 2.88e-6   NTclustered gi|2733972295|dbj|LC813553.1| 3138182 g182568 i0 79.381 0.955645161290323 97 16 38 4 2 96 270666 270760 Moumouvirus lavasanguinem DNA, nearly complete genome blastn 237 65.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus sp. 'lavasanguinem'

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;