RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA565584" and tax_phylum = "Nematomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Nematomorpha · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565584 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9482637 9482637 PRJNA565584_P_NODE_101668_length_296_cov_1.789238_g100516_i0 PRJNA565584 101668 296 1.789238 5.29614448 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 130 1.23e-25   NTclustered gi|2733961662|ref|XM_065465249.1| 3053472 g100516 i0 76.744 1.54391891891892 258 44 84 14 12 260 380 130 PREDICTED: Gordionus sp. m RMFG-2023 cytochrome c-like (LOC135928786), mRNA blastn 457 130 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
10762241 10762241 PRJNA565584_P_NODE_93409_length_310_cov_1.172996_g92257_i0 PRJNA565584 93409 310 1.172996 3.6362876 Gordionus sp. m RMFG-2023 3053472 Nematomorpha other_Eukaryota 213 1.26e-50   NTclustered gi|2733965677|ref|XM_065467221.1| 3053472 g92257 i0 83.19 24.9 232 39 75 0 1 232 384 153 PREDICTED: Gordionus sp. m RMFG-2023 serine/threonine-protein phosphatase PP1-beta catalytic subunit (LOC135930424), mRNA blastn 7719 213 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;