RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA565584" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565584 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4382814 4382814 PRJNA565584_P_NODE_155364_length_259_cov_1.150538_g154212_i0 PRJNA565584 155364 259 1.150538 2.97989342 Ptychodera flava 63121 Hemichordata other_Eukaryota 165 2.9e-36   NTclustered gi|2875746293|ref|XM_070703358.1| 63121 g154212 i0 82.447 2.29343629343629 188 33 73 0 4 191 380 193 PREDICTED: Ptychodera flava small ribosomal subunit protein uS12 (LOC139135718), mRNA blastn 594 165 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
22232856 22232856 PRJNA565584_P_NODE_179838_length_248_cov_2.685714_g178686_i0 PRJNA565584 179838 248 2.685714 6.66057072 Ptychodera flava 63121 Hemichordata other_Eukaryota 180 9.859999999999999e-41   NTclustered gi|2875710880|ref|XM_070686050.1| 63121 g178686 i0 88.966 53.625 145 16 58 0 104 248 1490 1346 PREDICTED: Ptychodera flava tubulin alpha-1A chain (LOC139121276), mRNA blastn 13299 180 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;