RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA565584" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565584 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3685716 3685716 PRJNA565584_P_NODE_17463_length_770_cov_11.560976_g16384_i0 PRJNA565584 17463 770 11.560976 89.0195152 Metazoa 33208 Echinodermata other_Eukaryota 195 1.21e-44   NTclustered gi|2707408381|ref|XM_054893204.2| 7653 g16384 i0 80.545 29.038961038961 257 46 33 4 367 621 597 343 PREDICTED: Lytechinus pictus dynein light chain 2, cytoplasmic-like (LOC129254696), mRNA blastn 22360 195 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
5658156 5658156 PRJNA565584_P_NODE_106685_length_290_cov_1.566820_g105533_i0 PRJNA565584 106685 290 1.56682 4.543778 Lytechinus pictus 7653 Echinodermata other_Eukaryota 54.7 0.007   NTclustered gi|2707415582|ref|XM_064099402.1| 7653 g105533 i0 94.444 0.344827586206897 36 1 12 1 184 218 609 574 PREDICTED: Lytechinus pictus late histone H1 (LOC129260346), mRNA blastn 100 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
6934124 6934124 PRJNA565584_P_NODE_199286_length_244_cov_1.286550_g198134_i0 PRJNA565584 199286 244 1.28655 3.139182 Diadema antillarum 105358 Echinodermata other_Eukaryota 207 4.44e-49   NTclustered gi|2919373928|ref|XM_071624062.1| 105358 g198134 i0 82.833 94.1762295081967 233 38 95 2 1 232 403 172 PREDICTED: Diadema antillarum dynein light chain 2, cytoplasmic (LOC139712222), mRNA blastn 22979 207 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
7513294 7513294 PRJNA565584_P_NODE_75546_length_342_cov_0.933086_g74395_i0 PRJNA565584 75546 342 0.933086 3.19115412 Metazoa 33208 Echinodermata other_Eukaryota 60.2 1.93e-4   NTclustered gi|1944911567|ref|XM_038212659.1| 46514 g74395 i0 97.222 5.20760233918129 36 0 11 1 235 270 4224 4190 PREDICTED: Patiria miniata nuclear factor of activated T-cells 5-like (LOC119737976), mRNA blastn 1781 60.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
14583199 14583199 PRJNA565584_P_NODE_105472_length_291_cov_2.045872_g104320_i0 PRJNA565584 105472 291 2.045872 5.95348752 Acanthaster planci 133434 Echinodermata other_Eukaryota 52.8 0.027   NTclustered gi|1229151169|ref|XR_002598004.1| 133434 g104320 i0 94.286 0.120274914089347 35 1 12 1 252 285 1594 1560 PREDICTED: Acanthaster planci uncharacterized LOC110977910 (LOC110977910), ncRNA blastn 35 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
14584900 14584900 PRJNA565584_P_NODE_200072_length_244_cov_0.900585_g198920_i0 PRJNA565584 200072 244 0.900585 2.1974274 Patiria miniata 46514 Echinodermata other_Eukaryota 126 1.28e-24   NTclustered gi|1944923555|ref|XM_038218481.1| 46514 g198920 i0 80.864 35.7663934426229 162 29 66 2 82 242 2258 2098 PREDICTED: Patiria miniata major vault protein-like (LOC119742522), mRNA blastn 8727 126 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
19682036 19682036 PRJNA565584_P_NODE_169176_length_251_cov_0.865169_g168024_i0 PRJNA565584 169176 251 0.865169 2.17157419 Patiria miniata 46514 Echinodermata other_Eukaryota 52.8 0.023   NTclustered gi|1944881371|ref|XM_038202473.1| 46514 g168024 i0 96.875 0.127490039840637 32 0 12 1 30 60 788 819 PREDICTED: Patiria miniata uncharacterized LOC119729751 (LOC119729751), mRNA blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
20261822 20261822 PRJNA565584_P_NODE_65696_length_366_cov_2.764505_g64545_i0 PRJNA565584 65696 366 2.764505 10.1180883 Opisthokonta 33154 Echinodermata other_Eukaryota 191 7.06e-44   NTclustered gi|1834282072|ref|XM_033782857.1| 7604 g64545 i0 79.004 40.948087431694 281 57 77 2 11 290 272 551 PREDICTED: Asterias rubens 60S ribosomal protein L12-like (LOC117299337), mRNA blastn 14987 191 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
21536915 21536915 PRJNA565584_P_NODE_38137_length_487_cov_2.787440_g36986_i0 PRJNA565584 38137 487 2.78744 13.5748328 Opisthokonta 33154 Echinodermata other_Eukaryota 303 1.1900000000000001e-77   NTclustered gi|1834254684|ref|XM_033773412.1| 7604 g36986 i0 78.603 65.1663244353183 458 98 94 0 1 458 541 84 PREDICTED: Asterias rubens ubiquitin-40S ribosomal protein S27a (LOC117291593), mRNA blastn 31736 303 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
23507481 23507481 PRJNA565584_P_NODE_146299_length_264_cov_3.057592_g145147_i0 PRJNA565584 146299 264 3.057592 8.07204288 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 52.8 0.024   NTclustered gi|1752359900|ref|XM_030984830.1| 7668 g145147 i0 100 0.106060606060606 28 0 11 0 164 191 847 874 PREDICTED: Strongylocentrotus purpuratus COP9 signalosome complex subunit 3 (LOC588733), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
25361034 25361034 PRJNA565584_P_NODE_215000_length_241_cov_0.916667_g213848_i0 PRJNA565584 215000 241 0.916667 2.20916747 Metazoa 33208 Echinodermata other_Eukaryota 99 2.75e-16   NTclustered gi|6681667|dbj|AB016821.1| 7650 g213848 i0 83.81 3.17427385892116 105 15 43 2 136 239 1182 1079 Hemicentrotus pulcherrimus mRNA for sea urchin Arp2 (SUArp2), complete cds blastn 765 99 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Hemicentrotus Hemicentrotus pulcherrimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;