RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA565584" and tax_phylum = "Ctenophora"

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tax_superkingdom 1

tax_phylum 1

  • Ctenophora · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA565584 · 1 ✖

analysis 1

  • blastn · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17132414 17132414 PRJNA565584_P_NODE_125574_length_278_cov_1.634146_g124422_i0 PRJNA565584 125574 278 1.634146 4.54292588 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 178 4.05e-40   NTclustered gi|2700955194|ref|XM_063817774.1| 2820187 g124422 i0 78.339 65.1546762589928 277 58 99 2 2 277 470 745 PREDICTED: Bolinopsis microptera tubulin alpha-1A chain-like (LOC134811063), mRNA blastn 18113 178 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;